Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 952,970 C→T intergenic (‑28253/‑162138) unknown ← / → unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1952,9700CT100.0% 49.6 / NA 19intergenic (‑28253/‑162138)unknown/unknowntRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (13/6);  total (13/6)

TTTTATCCCAAATAGTGATATCTATGTATTGATCTTTGTTATCTTTTAATAACTGGGGGAATACTCCATAATCACCATATTTTCTAGAAATATTAAATTTAAGAAGAAATTTGGCAAGGTATCCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGCATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAGTTATTCCATTCTTTATGTTCAGTGAACTTATCTATAAGCATTGTAATTATAATGCCAGGTAATAAAAGCATTACAATTTTTATTGTCAATTCATTCATATGAACTCGCTAAGAGTAAT  >  1/952727‑953206
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                            
ttttATCCCAAATAGTGATATCTATGTATTGATCTTTGTTATCTTTTAATAACTGGGGGAATACTCCATAATCACCATATTTTCTAGAAATATTAAATTTAAGGAGAAATTTGGCAAGGTATTCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTAttt                                                                                                                                                                                                                                       <  1:758324/251‑1 (MQ=255)
                    tCTATGTATTGATCTTTGTTATCTTTTAATAACTGGGGGAATACTCCATAATCACCATATTTTCTAGAAATATTAAATTTAAGAAGAAATTTGGCAAGGTATTCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTAcc                                                                                                                                                                                                                    >  1:99653/1‑250 (MQ=255)
                                                                 ccATAATCACCATATTTTCTAGAAATATTAAATTTAAGAAGAAATTTGGCAAGGTATTCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTAttt                                                                                                                                                                                                                                       <  1:744004/186‑1 (MQ=255)
                                                                              atTTTCTAGAAATATTAAATTTAAGAAGAAATTTGGCAAGGTATTCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATAtt                                                                                                                                                         >  1:182332/1‑251 (MQ=255)
                                                                                                                      gTATTCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAg                                                                                                                                                                                           <  1:870053/177‑1 (MQ=255)
                                                                                                                      gTATTCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAGTTATTc                                                                                                                  >  1:544605/1‑250 (MQ=255)
                                                                                                                                 gATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTc                                                                                                                                                        >  1:717948/1‑201 (MQ=255)
                                                                                                                                     tATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGtattat                                                                                                                                                                                                                                         >  1:118343/1‑116 (MQ=255)
                                                                                                                                            aCAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAg                                                                                                                        >  1:294448/1‑222 (MQ=255)
                                                                                                                                                                                                    aggtaggtTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCatat                                                                                                                                                   <  1:501123/139‑1 (MQ=255)
                                                                                                                                                                                                     ggtaggtTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTAttt                                                                                                                                                                                                                                       >  1:470286/1‑54 (MQ=255)
                                                                                                                                                                                                         ggtTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAg                                                                                                                                                                                           >  1:18652/1‑94 (MQ=255)
                                                                                                                                                                                                                         aaCATCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTta                                                                                                                           >  1:888326/1‑142 (MQ=255)
                                                                                                                                                                                                                             tCCCATACTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGaa                                                                                                                                                                                   >  1:699456/1‑82 (MQ=255)
                                                                                                                                                                                                                                    cTTGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAGTTATTCCATTCTTTATGTTCAGTGAACTTATCTATAAGc                                                                                 <  1:676295/173‑1 (MQ=255)
                                                                                                                                                                                                                                      tGAAGATACTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAGTTATTCCATTCTTTATGTTCAGTGAACTTATCTATAAGCATTGTAATTATAATGCCAGGTAATAAAAGCATTACAATTTTTATTGTCAATTCATTCATATGAACTCGCTAAGAGtaat  >  1:173441/1‑250 (MQ=255)
                                                                                                                                                                                                                                             aCTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAg                                                                                                                                                                                           >  1:719843/1‑58 (MQ=255)
                                                                                                                                                                                                                                             aCTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGTTAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAg                                                                                                                        >  1:776424/1‑125 (MQ=255)
                                                                                                                                                                                                                                             aCTCTGTATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAGTTATTCCATTCTTTATg                                                                                                       >  1:309196/1‑142 (MQ=255)
                                                                                                                                                                                                                                             aCTCTGTATTATTTAATGTGAAAGTTTCGTACCCGATTTTGGCACATTGATTTAATAg                                                                                                                                                                                           <  1:676877/58‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                            
TTTTATCCCAAATAGTGATATCTATGTATTGATCTTTGTTATCTTTTAATAACTGGGGGAATACTCCATAATCACCATATTTTCTAGAAATATTAAATTTAAGAAGAAATTTGGCAAGGTATCCTTTGTGATCTATGTAAACAAATAATAAACCAAGAAAAAATGACACTATTCCTGAAGCAATTACTTCATTATAAGGTAGGTTAATACTTGAATTAACATCCCATACTTGAAGATACTCTGCATTATTTAATGTGAAATTTTCGTACCCGATTTTGGCACATTGATTTAATAGCGATAGAATTTGTAATATTAAGTAAGATAATATTCCATATGAAATAACAAACAATGAATATTTATAGTTATTCCATTCTTTATGTTCAGTGAACTTATCTATAAGCATTGTAATTATAATGCCAGGTAATAAAAGCATTACAATTTTTATTGTCAATTCATTCATATGAACTCGCTAAGAGTAAT  >  1/952727‑953206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑