Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	1	554883–554934	555075–554991	58–193	25 [23]	[23] 24	unknown/unknown	tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

ACGCAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGACAGTGGAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGACCCC  >  1/555062‑555324               |                                                                                                                                                                                                                                                         acGCAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAagaaagaa              <  1:644502/251‑1 (MQ=11)  cGCAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAat             >  1:617337/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTGAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:429345/1‑251 (MQ=9)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:135809/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:356560/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:872857/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:417654/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:463194/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:485479/1‑251 (MQ=14)    cAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAatat           >  1:730409/1‑251 (MQ=14)     aaTGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATAtg          <  1:458548/251‑1 (MQ=14)      aTGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATAtgt         >  1:665521/1‑251 (MQ=14)       tGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATAtgtg        <  1:801090/251‑1 (MQ=14)         aaaGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTgg       <  1:873473/250‑1 (MQ=14)            gagCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAGGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAcc    >  1:440648/1‑250 (MQ=9)            gagCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAcc    >  1:886798/1‑250 (MQ=14)            gagCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAcc    >  1:39279/1‑250 (MQ=14)             agCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAccc   <  1:797545/250‑1 (MQ=14)             agCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAccc   >  1:844644/1‑250 (MQ=14)             agCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAccc   >  1:256028/1‑250 (MQ=14)             agCATATTCATATGCTTCCAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAccc   >  1:660786/1‑250 (MQ=9)              gCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAccc   >  1:666460/1‑249 (MQ=14)              gCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAccc   >  1:830910/1‑249 (MQ=14)               cATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGGTAGTGTAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGAcccc  <  1:398453/249‑1 (MQ=14)               |                                                                                                                                                                                                                                                         ACGCAATGAAAGAGCATATTCATATGCTTCTAAAAATTCCGCCGAAATTATCGGTATCAAGTTTTATGGGGTATTTAAAGGGAAAATCATTTGAAAGGCACGCAAACCTAAAATACAACTATGGTAACCGACATTTTTGGTCGAAAGGCTATTATGTAAGCACGGTAGGGCTAAATACAAAGACAGTGGAGGAGTATATAAGGAATCAGGAAAAGGAAGACATGATTCAGGATAATTTATCGAAGAAAGAATATGTGGACCCC  >  1/555062‑555324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑