Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	1	1,877,180	Δ1,001 bp	intergenic (‑41517/+5449)	unknown ← / ← unknown	tRNA‑Lys‑TTT/tRNA‑Ser‑TGA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	1	1877180	1878180	1001	78 [0]	[0] 77	unknown/unknown	tRNA‑Lys‑TTT/tRNA‑Ser‑TGA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	= 1877179	0 (0.000)	76 (0.880)	59/420	0.2	100%	intergenic (‑41516/+6450)	unknown/unknown	tRNA‑Lys‑TTT/tRNA‑Ser‑TGA
	?	1	1878181 =	0 (0.000)					intergenic (‑42518/+5448)	unknown/unknown	tRNA‑Lys‑TTT/tRNA‑Ser‑TGA

TTATTTGATGAAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCACACGAATTCTCCGGCGGTATGCGCCAACGGGTGATGATCGCTATGGCACTGTTATGTCGTCCGAAGCTGTTAATTGCCGACGAACCGACCACCGCGCTGGACGTGACCGTGCAAGCGCAAATCATGACTTTGTTAAACGAGCTGAAACACGAGTTCAATACGGCGATTATTATGATCACCCACGATCTCGGCGTGGTGGCGGGCATTTGTGATCATGTGCTGGTGATGTATGCCGGTCGCACCATGGAA  >  1/1876932‑1877429                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                           ttattTGATGAAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgca                                                                                                                                                                                                                                                         >  1:602988‑M1/1‑248 (MQ=255) ttattTGATGAAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgca                                                                                                                                                                                                                                                         >  1:688295‑M1/1‑248 (MQ=255)   attTGATGAAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatg                                                                                                                                                                                                                                                       >  1:378907‑M1/1‑246 (MQ=255)   attTGATGAAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatg                                                                                                                                                                                                                                                       >  1:314945‑M1/1‑246 (MQ=255)      tgatgaAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaat                                                                                                                                                                                                                                                    <  1:806917‑M1/251‑9 (MQ=255)                       tCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgt                                                                                                                                                                                                                                   <  1:824525‑M1/251‑26 (MQ=255)                        cAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgt                                                                                                                                                                                                                                   >  1:872446‑M1/1‑225 (MQ=255)                            cTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacg                                                                                                                                                                                                                              <  1:324621‑M1/251‑31 (MQ=255)                              gCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgta                                                                                                                                                                                                                            >  1:846869‑M1/1‑219 (MQ=255)                                  aTAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcgg                                                                                                                                                                                                                        >  1:538258‑M1/1‑215 (MQ=255)                                   tAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggg                                                                                                                                                                                                                       >  1:645126‑M1/1‑214 (MQ=255)                                      agaAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtat                                                                                                                                                                                                                     <  1:191184‑M1/250‑40 (MQ=255)                                         aaCTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcc                                                                                                                                                                                                                 <  1:313778‑M1/251‑44 (MQ=255)                                          aCTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgccc                                                                                                                                                                                                                <  1:473200‑M1/251‑45 (MQ=255)                                             gAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtg                                                                                                                                                                                                             >  1:328496‑M1/1‑204 (MQ=255)                                             gAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcc                                                                                                                                                                                                                 >  1:774656‑M1/1‑204 (MQ=255)                                               aCAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggaggacaatgtcaacgtatcggtattgcccgtgca                                                                                                                                                                                                           <  1:427560‑M1/251‑50 (MQ=255)                                                cAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcat                                                                                                                                                                                                          <  1:478319‑M1/251‑51 (MQ=255)                                                   aaTCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaa                                                                                                                                                                                                       <  1:234967‑M1/251‑54 (MQ=255)                                                      ccGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaatta                                                                                                                                                                                                    >  1:883642‑M1/1‑195 (MQ=255)                                                         cgcgGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatc                                                                                                                                                                                                  <  1:757276‑M1/250‑59 (MQ=255)                                                             gAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtat                                                                                                                                                                                                                     <  1:38314‑M1/227‑40 (MQ=255)                                                                    tttCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggta                                                                                                                                                                                                                      >  1:487900‑M1/1‑181 (MQ=255)                                                                        tATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAAATCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgatta                                                                                                                                                                                  <  1:591042‑M1/251‑75 (MQ=255)                                                                               ttCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcga                                                                                                                                                                           >  1:876583‑M1/1‑170 (MQ=255)                                                                                 ccAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgca                                                                                                                                                                                                           >  1:688249‑M1/1‑168 (MQ=255)                                                                                       tCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccgg                                                                                                                                                                   >  1:275499‑M1/1‑162 (MQ=255)                                                                                       tCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccgg                                                                                                                                                                   >  1:501645‑M1/1‑162 (MQ=255)                                                                                       tCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaatt                                                                                                                                                                                                     <  1:825478‑M1/217‑56 (MQ=255)                                                                                                      gAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATTTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattt                                                                                                                                                                                                                                                  <  1:399706‑M1/157‑11 (MQ=255)                                                                                                          ccTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgttt                                                                                                                                                 >  1:773427‑M1/1‑143 (MQ=255)                                                                                                                   aaaaTCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcagg                                                                                                                                        <  1:747157‑M1/250‑117 (MQ=255)                                                                                                                      aTCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgca                                                                                                                                    >  1:345657‑M1/1‑131 (MQ=255)                                                                                                                          gCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagt                                                                                                                                 <  1:813240‑M1/250‑124 (MQ=255)                                                                                                                                 aCTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatt                                                                                                                         >  1:152366‑M1/1‑120 (MQ=255)                                                                                                                                 aCTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgccaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatt                                                                                                                         >  1:460445‑M1/1‑120 (MQ=255)                                                                                                                                  cTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcagg                                                                                                                                        <  1:360149‑M1/235‑117 (MQ=255)                                                                                                                                           gtgtTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaat                                                                                                                          >  1:847805‑M1/1‑110 (MQ=255)                                                                                                                                           gtgtTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagt                                                                                                                                 <  1:606342‑M1/233‑124 (MQ=255)                                                                                                                                           gtgtTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaa                                                                                                                                                                                        >  1:741279‑M1/1‑110 (MQ=255)                                                                                                                                           gtgtTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgc                                                                                                                                                                                                            >  1:427046‑M1/1‑110 (MQ=255)                                                                                                                                            tgtTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcg                                                                                                              >  1:602663‑M1/1‑109 (MQ=255)                                                                                                                                            tgtTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattc                                                                                                                                           >  1:384738‑M1/1‑109 (MQ=255)                                                                                                                                                 atatTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttc                                                                                                                                                <  1:416366‑M1/212‑109 (MQ=255)                                                                                                                                                 atatTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattat                                                                                                                                                                                                   <  1:65673‑M1/161‑58 (MQ=255)                                                                                                                                                      gCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaag                                                                                                    >  1:226547‑M1/1‑99 (MQ=255)                                                                                                                                                             ggCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaac                                                                                                                                                                                              <  1:740012‑M1/154‑63 (MQ=255)                                                                                                                                                             ggCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacg                                                                                                                                                                                                                              >  1:650589‑M1/1‑92 (MQ=255)                                                                                                                                                               cTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggac                                                                                            <  1:779537‑M1/250‑161 (MQ=255)                                                                                                                                                               cTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggac                                                                                            <  1:214235‑M1/250‑161 (MQ=255)                                                                                                                                                                 aCGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgcc                                                                                                                                                           >  1:868334‑M1/1‑88 (MQ=255)                                                                                                                                                                            aCGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcat                                                                                 <  1:18011‑M1/248‑172 (MQ=255)                                                                                                                                                                            aCGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctca                                                                                  <  1:593371‑M1/247‑171 (MQ=255)                                                                                                                                                                               gCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagt                                                                                                                                 <  1:608167‑M1/197‑124 (MQ=255)                                                                                                                                                                               gCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattc                                                                                                                                           <  1:861107‑M1/187‑114 (MQ=255)                                                                                                                                                                                cATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCC                                                                                                                                                                                                                                                            >  1:317080‑M1/1‑73 (MQ=255)                                                                                                                                                                                             ggTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgtgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctgg                                                             >  1:419902‑M1/1‑60 (MQ=255)                                                                                                                                                                                                 aaaaTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcgg                                                          <  1:588433‑M1/250‑195 (MQ=255)                                                                                                                                                                                                 aaaaTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcgg                                                          <  1:632787‑M1/250‑195 (MQ=255)                                                                                                                                                                                                 aaaaTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcgg                                                          <  1:387074‑M1/250‑195 (MQ=255)                                                                                                                                                                                                 aaaaTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcgg                                                          <  1:123871‑M1/250‑195 (MQ=255)                                                                                                                                                                                                   aaTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtgg                                                       >  1:642930‑M1/1‑54 (MQ=255)                                                                                                                                                                                                   aaTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaa                                                                                                                                                                                                       <  1:146531‑M1/107‑54 (MQ=255)                                                                                                                                                                                                    aTGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccg                                                                                                                                                                                                               >  1:779366‑M1/1‑53 (MQ=255)                                                                                                                                                                                                                gTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtct                                                                                      <  1:891221‑M1/207‑167 (MQ=255)                                                                                                                                                                                                                    aaaTGCCGGAAGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgat                                      <  1:417492‑M1/251‑215 (MQ=255)                                                                                                                                                                                                                             aaGCCAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattg                             <  1:598846‑M1/251‑224 (MQ=255)                                                                                                                                                                                                                                ccAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattgg                            <  1:415730‑M1/249‑225 (MQ=255)                                                                                                                                                                                                                                 cAAGAAACGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtc                                                                                       >  1:593137‑M1/1‑24 (MQ=255)                                                                                                                                                                                                                                       aCGCATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattggttatgtat                    >  1:117376‑M1/1‑18 (MQ=255)                                                                                                                                                                                                                                          cATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattggttatgtatctgg                >  1:35186‑M1/1‑15 (MQ=255)                                                                                                                                                                                                                                          cATGGGGATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattggttatgtatctg                 <  1:309838‑M1/250‑236 (MQ=255)                                                                                                                                                                                                                                              gggATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcgg                                                          >  1:752186‑M1/1‑11 (MQ=255)                                                                                                                                                                                                                                               ggATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattggttatgtatctgggaaa            <  1:109496‑M1/250‑241 (MQ=255)                                                                                                                                                                                                                                                gATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattggttatgtatctgggaaatg          >  1:789351‑M1/1‑9 (MQ=255)                                                                                                                                                                                                                                                gATGTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacac                                               <  1:64323‑M1/214‑206 (MQ=255)                                                                                                                                                                                                                                                   gTATCCgcatgaattttccggcggacaatgtcaacgtatcggtattgcc                                                                                                                                                                                                                 >  1:269323‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                                        cgcatgaattttccggcggacaatgtcaacgtatcggtattgcccgtgcattaattatcgaaccgaaaatgattatttgcgatgaaccggtttccgccttggacgtttccattcaggcgcaagtagtgaatttgctaaaatcgctgcaaaaagaaatggacttgtctctcatttttattgcgcacgatctggcggtggtgaaacacatttccgatcgcgtattggttatgtatctgggaaatgccatggag  <  1:526715‑M1/251‑251 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                           TTATTTGATGAAGTCCAATTGGTCAATCTGCCAATAGAGAAACTGAACAAAATCCGCGCGGAACAAATTTCTATGATTTTCCAGGATCCCATGACGTCGCTGAATCCTTATATGAAAATCGGCGAGCAACTCATGGAAGTGTTAATATTGCACAAAGGCTACGACAAACAGACGGCATTTAACGAATCGGTGAAAATGTTGGATGCGGTAAAAATGCCGGAAGCCAAGAAACGCATGGGGATGTATCCACACGAATTCTCCGGCGGTATGCGCCAACGGGTGATGATCGCTATGGCACTGTTATGTCGTCCGAAGCTGTTAATTGCCGACGAACCGACCACCGCGCTGGACGTGACCGTGCAAGCGCAAATCATGACTTTGTTAAACGAGCTGAAACACGAGTTCAATACGGCGATTATTATGATCACCCACGATCTCGGCGTGGTGGCGGGCATTTGTGATCATGTGCTGGTGATGTATGCCGGTCGCACCATGGAA  >  1/1876932‑1877429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑