Predicted mutation
evidence seq id position mutation annotation gene description
MC JC 1 1,278,403 Δ10 bp intergenic (+139273/+114899) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ 1 1278403 1278412 10 66 [0] [0] 66 unknown/unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 12784020 (0.000)66 (0.750) 51/428 0.5 100% intergenic (+139272/+114909) unknown/unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC
?1 1278413 = 0 (0.000)intergenic (+139283/+114898) unknown/unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

CCAAAAATAAATTGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAGAACGATCAAAATCCTGTATAATCTAGGCAATTTTTTGTTTAAATAATGCATTGTGAGATCCCTTAATGCTTGAAACATCACAAACAATCCCCGAACTGGTTTCATGGGCGAAAGAACGCGAATTTTCGCTGAATTTACCCACCGATCGTCTGGCGTTTTTATTGGCAATTGCCATTTATAATAACGAACGTTTTGACGGTGAAATGATCGAATCGGATCTGGTGGACATTTTTCGCCACGTT  >  1/1278155‑1278645
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   
ccAAAAATAAATTGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaat                                                                                                                                                                                                                                                  <  1:593525‑M1/251‑4 (MQ=255)
ccAAAAATAAATTGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaat                                                                                                                                                                                                                                                  <  1:269542‑M1/251‑4 (MQ=255)
  aaaaaTAAATTGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcc                                                                                                                                                                                                                                                <  1:164557‑M1/251‑6 (MQ=255)
           ttGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatc                                                                                                                                                                                                                                       <  1:483043‑M1/251‑15 (MQ=255)
            tGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatct                                                                                                                                                                                                                                      <  1:148538‑M1/251‑16 (MQ=255)
                  aaTATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaa                                                                                                                                                                                                                                >  1:376611‑M1/1‑230 (MQ=255)
                        gTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaat                                                                                                                                                                                                                                                  <  1:368494‑M1/227‑4 (MQ=255)
                           gTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtt                                                                                                                                                                                                                       >  1:485400‑M1/1‑221 (MQ=255)
                                 cgTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttttttaaata                                                                                                                                                                                                                 >  1:798363‑M1/1‑215 (MQ=255)
                                           cAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtg                                                                                                                                                                                                       <  1:97078‑M1/251‑47 (MQ=255)
                                           cAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcat                                                                                                                                                                                                           <  1:66186‑M1/247‑43 (MQ=255)
                                                tgctgcGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagat                                                                                                                                                                                                   <  1:228714‑M1/250‑51 (MQ=255)
                                                         aCTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATTTTGTGCCCCTTTTTTCGCCGCTTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGCTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatg                                                                                                                                                                                          >  1:178034‑M1/1‑191 (MQ=255)
                                                         aCTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGGTTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtat                                                                                                                                                                                                                                           >  1:801315‑M1/1‑191 (MQ=255)
                                                                ggATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaa                                                                                                                                                                                   >  1:250902‑M1/1‑184 (MQ=255)
                                                                ggATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgaga                                                                                                                                                                                                    <  1:420310‑M1/233‑50 (MQ=255)
                                                                  atgatATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacat                                                                                                                                                                                >  1:696314‑M1/1‑182 (MQ=255)
                                                                    gatATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatg                                                                                                                                                                                          >  1:694877‑M1/1‑180 (MQ=255)
                                                                       atGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaa                                                                                                                                                                           >  1:403880‑M1/1‑177 (MQ=255)
                                                                         gCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaa                                                                                                                                                                          >  1:881119‑M1/1‑175 (MQ=255)
                                                                         gCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaac                                                                                                                                                                                  >  1:336355‑M1/1‑175 (MQ=255)
                                                                          cAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaac                                                                                                                                                                         <  1:118732‑M1/250‑77 (MQ=255)
                                                                            gaatgAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAATGGATCTTGTGCCCCTTTTTTTGCCGATTTTTATAGAATCGGTATCTTGAAAAGAAAACTGTTATAAATTTTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaattctgtataattt                                                                                                                                                                                                                                      >  1:549650‑M1/3‑172 (MQ=255)
                                                                            gTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaat                                                                                                                                                                      >  1:524373‑M1/1‑172 (MQ=255)
                                                                            gTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggca                                                                                                                                                                                                                                 <  1:258933‑M1/192‑21 (MQ=255)
                                                                            gTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatct                                                                                                                                                                                                                                      >  1:196339‑M1/1‑172 (MQ=255)
                                                                              aTGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatc                                                                                                                                                                     >  1:88677‑M1/1‑170 (MQ=255)
                                                                                gAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTACTTTCAAGCTGTTAaatcctgtataa                                                                                                                                                                                                                                         >  1:92080‑M1/1‑168 (MQ=255)
                                                                                          atgatgAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatct                                                                                                                                                                                                                                      >  1:694215‑M1/1‑158 (MQ=255)
                                                                                            gatgaAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaac                                                                                                                                                                         >  1:842372‑M1/1‑156 (MQ=255)
                                                                                                 aGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatggg                                                                                                                                                  >  1:46221‑M1/1‑151 (MQ=255)
                                                                                                              gAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcc                                                                                                                                                                                                                                                <  1:866293‑M1/143‑6 (MQ=255)
                                                                                                               aaTTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaat                                                                                                                                   >  1:171373‑M1/1‑137 (MQ=255)
                                                                                                                       cGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctg                                                                                                                           <  1:768851‑M1/251‑123 (MQ=255)
                                                                                                                           aaGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtg                                                                                                                                                                                                       <  1:750924‑M1/171‑47 (MQ=255)
                                                                                                                                   ggCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccac                                                                                                                >  1:874139‑M1/1‑117 (MQ=255)
                                                                                                                                   ggCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccac                                                                                                                >  1:735340‑M1/1‑117 (MQ=255)
                                                                                                                                   ggCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtga                                                                                                                                                                                                      <  1:317887‑M1/164‑48 (MQ=255)
                                                                                                                                           gggATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgt                                                                                                         >  1:171600‑M1/1‑109 (MQ=255)
                                                                                                                                              aTCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaat                                                                                                                        >  1:666150‑M1/1‑106 (MQ=255)
                                                                                                                                               tCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcg                                                                                                   <  1:313328‑M1/251‑147 (MQ=255)
                                                                                                                                                cTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgt                                                                                                  >  1:653543‑M1/1‑104 (MQ=255)
                                                                                                                                                        ccTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattg                                                                                          >  1:818167‑M1/1‑96 (MQ=255)
                                                                                                                                                         cTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtg                                                                                                                                                                                                       >  1:617086‑M1/1‑95 (MQ=255)
                                                                                                                                                                        tttATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaagccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttata                                                                          <  1:497767‑M1/251‑172 (MQ=255)
                                                                                                                                                                         ttATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatct                                                                                                                                                                                                                                      <  1:798276‑M1/94‑16 (MQ=255)
                                                                                                                                                                          tataGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataat                                                                        <  1:329738‑M1/251‑174 (MQ=255)
                                                                                                                                                                            taGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataa                                                                      <  1:470325‑M1/251‑176 (MQ=255)
                                                                                                                                                                              gAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgaga                                                                                                                                                                                                    <  1:510414‑M1/123‑50 (MQ=255)
                                                                                                                                                                                 tCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatc                                                                                                                                                                     <  1:579830‑M1/151‑81 (MQ=255)
                                                                                                                                                                                 tCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgt                                                                                                                                                                                                                        <  1:479847‑M1/100‑30 (MQ=255)
                                                                                                                                                                                         ttGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAagtcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttttgac                                                         <  1:754094‑M1/251‑189 (MQ=255)
                                                                                                                                                                                             aaagaaaaCCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttttgacggtg                                                     >  1:731562‑M1/1‑59 (MQ=255)
                                                                                                                                                                                             aaagaaaaCCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcac                                                                                                                                                                             <  1:594511‑M1/131‑73 (MQ=255)
                                                                                                                                                                                                     ccGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgcca                                                                                >  1:186074‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                     ccGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgat                                                                                                            >  1:358553‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                     ccGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTCTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatg                                                                                                                                                                                          >  1:806405‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                       gTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttttgacggtgaaatgatcga                                           >  1:641285‑M1/1‑49 (MQ=255)
                                                                                                                                                                                                       gTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataa                                                                      >  1:181625‑M1/1‑49 (MQ=255)
                                                                                                                                                                                                       gTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAaatcc                                                                                                                                                                                                                                                <  1:223661‑M1/54‑6 (MQ=255)
                                                                                                                                                                                                                        ttttCACCGCACTTGCTATTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaa                                                                                                                                    >  1:263180‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                                                         aTTTTCAAGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttttgacggtgaaatgatc                                             >  1:844149‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                                aGCTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttttgacggtgaaatgatcgaatcggatctggtggacatttttcgccacttttcggattaat  >  1:580160‑M1/1‑8 (MQ=255)
                                                                                                                                                                                                                                                  cTGTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttt                                                             >  1:373060‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                    gTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgcttgaaacatcacaaacaatccccgaactggtttcatgggcgaaagaacgcgaattttcgctgaatttacccaccgatcgtctggcgtttttattggcaattgccatttataataacgaacgttttgacggtgaaatgatcgaatcggatctggtggacatttttcgccacgtttccgg       <  1:575384‑M1/242‑239 (MQ=255)
                                                                                                                                                                                                                                                    gTTAaatcctgtataatctaggcaattttttgtttaaataatgcattgtgagatcccttaatgc                                                                                                                                                                                         >  1:619931‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   
CCAAAAATAAATTGGAAAAATATGGTTGTACCGCGTTAAACAGCAAGGTGCTGCGAGACTTTGTGGATGATATGCAGTATGAAGAGGGCTATGATGAAGCCGGAATGGACGAATTAATCCGAAAAGTGGCGGGCTAGAAGGGATCTTGTGCCCCTTTTTTCGCCGATTTTTATAGAATCGTTATCTTGAAAAGAAAACCGTTATAAATTCTTCAAATTTTCACCGCACTTGCTATTTTCAAGCTGTTAGAACGATCAAAATCCTGTATAATCTAGGCAATTTTTTGTTTAAATAATGCATTGTGAGATCCCTTAATGCTTGAAACATCACAAACAATCCCCGAACTGGTTTCATGGGCGAAAGAACGCGAATTTTCGCTGAATTTACCCACCGATCGTCTGGCGTTTTTATTGGCAATTGCCATTTATAATAACGAACGTTTTGACGGTGAAATGATCGAATCGGATCTGGTGGACATTTTTCGCCACGTT  >  1/1278155‑1278645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑