| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 341,790 | Δ12 bp | intergenic (‑57161/‑21526) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 341790 | 341801 | 12 | 86 [0] | [0] 85 | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 341789 | 0 (0.000) | 83 (0.980) | 58/412 | 0.2 | 100% | intergenic (‑57160/‑21538) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| ? | 1 | 341802 = | 0 (0.000) | intergenic (‑57173/‑21525) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA | |||||
CCCCCGACACGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATCTAACCCGCTATTACGCCAAACAAGGTATCGTGCCAAAATTCTATTTCATCGTGGACAGGCTCGACCTCTTGAAACAGGCGCAGCAGGAATTCACCGCCCGTGACCTCATCGTCCACACCATCGACAGCCGCGAAGCCTTCGCCGCCGACATCAAATCCGCCCAAACCCTGCACAACCATTCCGGCAAAGCGGAAATCACCGTCGTCAACATCCAAAAATTCAAAGACGACCCCGACGTCGTCACCA > 1/341542‑342036 | cccccGACACGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATta > 1:327404‑M1/1‑248 (MQ=255)cccccGACACGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATta > 1:847285‑M1/1‑248 (MQ=255) cccgccccgcctaccAACCGAATCCTGACCCCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgc < 1:524627‑M1/244‑6 (MQ=255) cccGACACGCCTACCAACCGAATCCTGCCCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgc < 1:125801‑M1/251‑6 (MQ=255) cccGACACGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgc < 1:374543‑M1/251‑6 (MQ=255) cGACACGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgcca > 1:546599‑M1/1‑244 (MQ=255) cGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaa > 1:641824‑M1/1‑239 (MQ=255) ccTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaagg > 1:215148‑M1/1‑237 (MQ=255) cTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggt < 1:217996‑M1/251‑16 (MQ=255) tACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggta > 1:563285‑M1/1‑235 (MQ=255) cccacccgaatcCTGCCCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat < 1:726007‑M1/246‑18 (MQ=255) cccaACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat < 1:573986‑M1/250‑18 (MQ=255) aCCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtg > 1:746137‑M1/1‑230 (MQ=255) aCCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtg > 1:90581‑M1/1‑230 (MQ=255) aTCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaa > 1:870070‑M1/1‑225 (MQ=255) ccTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaat > 1:472392‑M1/1‑223 (MQ=255) tGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCATAAAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaac > 1:94174‑M1/1‑222 (MQ=255) ctgctgTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcat > 1:675320‑M1/1‑213 (MQ=255) gctgTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcg > 1:673357‑M1/1‑211 (MQ=255) gtgCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtgg > 1:749197‑M1/1‑208 (MQ=255) gtgCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctattt > 1:322339‑M1/1‑208 (MQ=255) ccGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggac < 1:224505‑M1/250‑46 (MQ=255) aCCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggct < 1:351523‑M1/250‑51 (MQ=255) cgcctTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat > 1:825988‑M1/1‑193 (MQ=255) cctTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttc > 1:581950‑M1/1‑191 (MQ=255) cctTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat < 1:186867‑M1/208‑18 (MQ=255) gCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgc > 1:200423‑M1/1‑181 (MQ=255) cAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgca > 1:243712‑M1/1‑180 (MQ=255) cAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcat > 1:787371‑M1/1‑180 (MQ=255) cAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggt > 1:391229‑M1/1‑180 (MQ=255) tACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagca < 1:18666‑M1/251‑75 (MQ=255) gCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaa > 1:55795‑M1/1‑173 (MQ=255) gCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaa > 1:570206‑M1/1‑173 (MQ=255) gCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaa > 1:501377‑M1/1‑173 (MQ=255) cTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaa < 1:500636‑M1/250‑79 (MQ=255) ttGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattc < 1:424515‑M1/251‑82 (MQ=255) acacAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgac > 1:174101‑M1/1‑156 (MQ=255) acacAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgac > 1:404856‑M1/1‑156 (MQ=255) acacAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctattt > 1:710650‑M1/1‑156 (MQ=255) aaaaCGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatc < 1:318633‑M1/251‑100 (MQ=255) aaaCGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcg < 1:406430‑M1/251‑101 (MQ=255) aT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacac < 1:320863‑M1/251‑108 (MQ=255) aT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCG‑AAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacacc < 1:550981‑M1/251‑109 (MQ=255) aaaaCACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcg > 1:792297‑M1/1‑139 (MQ=255) aaaCACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat > 1:108925‑M1/1‑138 (MQ=255) aaCACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgac < 1:534042‑M1/251‑115 (MQ=255) acaTCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagc < 1:363255‑M1/251‑118 (MQ=255) catcatGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgaca > 1:108208‑M1/1‑133 (MQ=255) catcatGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat < 1:168553‑M1/150‑18 (MQ=255) gcgcTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaag > 1:243584‑M1/1‑127 (MQ=255) gcgcTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacacc < 1:452443‑M1/235‑109 (MQ=255) gcgcTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcc < 1:726960‑M1/214‑88 (MQ=255) gcgcTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTAT > 1:167608‑M1/1‑127 (MQ=255) aTCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagcctt > 1:854008‑M1/1‑122 (MQ=255) cGCAGCTTTTCGCCGCCGACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgcc < 1:706847‑M1/251‑133 (MQ=255) gCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccg > 1:329358‑M1/1‑115 (MQ=255) gccTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaat > 1:896634‑M1/1‑105 (MQ=255) gccTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagc < 1:424378‑M1/222‑118 (MQ=255) aCCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacct > 1:840166‑M1/1‑96 (MQ=255) ccGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaac > 1:624076‑M1/1‑95 (MQ=255) cGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccc < 1:111780‑M1/251‑158 (MQ=255) cGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccc < 1:31059‑M1/251‑158 (MQ=255) cGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccc < 1:352645‑M1/251‑158 (MQ=255) gAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaacc > 1:400414‑M1/1‑93 (MQ=255) aaaaaCACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtat < 1:425974‑M1/109‑18 (MQ=255) acCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaac < 1:375347‑M1/251‑166 (MQ=255) gACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccatt > 1:28110‑M1/1‑82 (MQ=255) cccaACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattc < 1:855041‑M1/250‑171 (MQ=255) cAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcac > 1:484557‑M1/1‑79 (MQ=255) aCGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggc < 1:15481‑M1/251‑175 (MQ=255) cGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccg < 1:827869‑M1/251‑191 (MQ=255) gcaTCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgt > 1:295608‑M1/2‑59 (MQ=255) cATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcg < 1:882296‑M1/251‑194 (MQ=255) acCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgacgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatcca > 1:105399‑M1/1‑48 (MQ=255) acCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgagacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatcca > 1:216316‑M1/1‑48 (MQ=255) cccAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatc > 1:294881‑M1/1‑47 (MQ=255) cTCGCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacg < 1:886385‑M1/250‑227 (MQ=255) gCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacgtcgt > 1:402381‑M1/1‑21 (MQ=255) gCCTACTACAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaacca > 1:100368‑M1/1‑21 (MQ=255) tactacAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacgtcgtca > 1:412748‑M1/1‑18 (MQ=255) ctacAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcacagacgaccccgacgtcgtcacca > 1:35130‑M1/1‑16 (MQ=255) ctacAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacgtcgtcacca > 1:753185‑M1/1‑16 (MQ=255) ctacAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacgtcgtcacca > 1:405861‑M1/1‑16 (MQ=255) ctacAGCACCCGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccc > 1:617118‑M1/1‑16 (MQ=255) cGCTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacgtcgtcaccaaaagcgacta > 1:265400‑M1/1‑6 (MQ=255) cTATtacgccaaacaaggtatcgtgccaaaattctatttcatcgtggacaggctcgacctcttgaaacaggcgcagcaggaattcaccgcccgtgacctcatcgtccacaccatcgacagccgcgaagccttcgccgccgacatcaaatccgcccaaaccctgcacaaccattccggcaaagcggaaatcaccgtcgtcaacatccaaaaattcaaagacgaccccgacgtcgtcaccaaaagcgactacg > 1:693871‑M1/1‑4 (MQ=255) | CCCCCGACACGCCTACCAACCGAATCCTGACCTCGCTGCTGTGCCGCGACCGCCTCGCCTTTCTCCTGCAATACGGCTTTGCATACGTCGAAACACAAAACGGCAT‑AAAAAAACACATCATGCGCTATCCGCAGCTTTTCGCCGCCTACGCCACCGAAAAACACCTGACCAACGGCGGCAAAAAAGGCGTCATCTGGCACACCCAAGGCTCCGGCAAAACCGCGCTCGCCTACTACAGCACCCGCTATCTAACCCGCTATTACGCCAAACAAGGTATCGTGCCAAAATTCTATTTCATCGTGGACAGGCTCGACCTCTTGAAACAGGCGCAGCAGGAATTCACCGCCCGTGACCTCATCGTCCACACCATCGACAGCCGCGAAGCCTTCGCCGCCGACATCAAATCCGCCCAAACCCTGCACAACCATTCCGGCAAAGCGGAAATCACCGTCGTCAACATCCAAAAATTCAAAGACGACCCCGACGTCGTCACCA > 1/341542‑342036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |