| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1130883 | 0 (0.000) | 10 (0.110) +CGA |
7/424 | 5.6 | 100% | intergenic (+15393/‑8171) | unknown/unknown | tRNA‑Gln‑TTG/tRNA‑Met‑CAT |
| ? | 1 | 1131552 = | 0 (0.000) | intergenic (+16062/‑7502) | unknown/unknown | tRNA‑Gln‑TTG/tRNA‑Met‑CAT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
AACCTTTAATTTCATTATCTTGTAAACACGCGACACAGTTTTCTGCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1130784‑1130883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGTTCATTATAGTCAAGAACAAAAAGTACACATTTTAGATAAAATGTACTAAATGTTCATATTTAATTGATTTTAAAAGAAATAAATTTTCAAAATTTTTTGATTAATTGCTGAATTTGTGACCTAGATCACAAAAAAAAGAGGGGGGAATTTT > 1/1131552‑1131759 ||| catctaattccttttgcgccTGTAAACACGCGACACAGTTTTCTGCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGTTCATTATAGTCAAGAACAAAAAGTACATATTTTAGATAAAATGTATTAAATGTTCATAT < 1:132893/199‑1 aattccttttgcgccTGTAAACACGCGACACAGTTTTCTGCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGT > 1:564406/16‑155 TGTAAACCCGCGACACAGTTTTCTGCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGT < 1:843996/131‑1 CAGTTTTCTGCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTAC < 1:581910/118‑1 GCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGTTCATTAT < 1:481138/123‑1 ACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGTTCATTATAGTCAAGAACAAAAAGTACATATTTTAGATAAAATGTATTAAATGTTCATATTTAATTGATTTTAAAAGAAATAAATTTTCAAAATTTTTTGATTAATTGCTGAATTTGTGACCTAGATCACAAAAAAAAGAGGGGGGAATTTT > 1:106150/1‑251 TAAATCAGCCGATAATTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTAT < 1:42243/83‑1 TTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGTTCATTATAGTCAAGAACAAAAAG > 1:760012/1‑105 TTTATATCCCGCATGAGACCAACGATTTTAAAGAGCAACTCAAAGT > 1:695574/1‑46 GCATGAGACCAACGATTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTAT < 1:344860/61‑1 ||| AACCTTTAATTTCATTATCTTGTAAACACGCGACACAGTTTTCTGCTTGGGGGTTACTCGACTTAAATCAGCCGATAATTTATATCCCGCATGAGACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1130784‑1130883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTAAAGAGCAACTCAAAGTGGTTTGCTTTGATGTGGTGTATTATGTACTTATAGTTCATTATAGTCAAGAACAAAAAGTACACATTTTAGATAAAATGTACTAAATGTTCATATTTAATTGATTTTAAAAGAAATAAATTTTCAAAATTTTTTGATTAATTGCTGAATTTGTGACCTAGATCACAAAAAAAAGAGGGGGGAATTTT > 1/1131552‑1131759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |