| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 577,404 | +T | intergenic (+439/‑10725) | unknown → / → unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Pro‑TGG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 577,402 | 1 | . | T | 100.0% | 165.1 / NA | 61 | intergenic (+437/‑10727) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Pro‑TGG |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (27/34); total (27/34) | |||||||||||
AAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTG‑TTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAATTTCCTTTCCTTAGTTCATATCGGCGTAACGGAAAACGGCGTTATCC > 1/577173‑577647 | aaaGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGtat < 1:310331/250‑1 (MQ=17)aaaGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGtat < 1:64173/250‑1 (MQ=17) aaCGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGc < 1:215043/249‑1 (MQ=21) aaCGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGc < 1:658941/249‑1 (MQ=21) aaCGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGAGAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTc < 1:437185/251‑1 (MQ=21) gagaAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAgaga > 1:874561/1‑251 (MQ=37) gAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAAc > 1:596511/1‑222 (MQ=14) gAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAAt < 1:861181/244‑1 (MQ=255) aaagcgaaagcgCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTAc < 1:862751/251‑1 (MQ=255) cagagagaGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGa > 1:126365/3‑251 (MQ=255) ggAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTc < 1:639473/206‑1 (MQ=25) agagGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATGCCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGataata < 1:190116/212‑1 (MQ=255) ggATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTAc < 1:356047/226‑1 (MQ=255) gAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAgaga < 1:554253/190‑1 (MQ=255) atatTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGt < 1:604548/251‑1 (MQ=255) gcggcgATAGTGCGGTGGTACCACCTGAAACCATGCCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGAc < 1:131053/250‑1 (MQ=255) aTAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGtat < 1:546963/166‑1 (MQ=21) gTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTaa < 1:393878/246‑1 (MQ=255) gTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTc > 1:793347/1‑250 (MQ=255) gtggtACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCa > 1:882247/1‑218 (MQ=255) ggtACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACtt < 1:160177/190‑1 (MQ=255) ggtACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGa > 1:262240/1‑233 (MQ=255) ggtACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAACGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTAc < 1:49533/188‑1 (MQ=255) tACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCATAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAggg < 1:835662/251‑1 (MQ=255) accTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTttatta < 1:727822/189‑1 (MQ=255) accTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAg > 1:34320/1‑212 (MQ=255) accTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGtcat > 1:828490/1‑251 (MQ=255) accTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGtcat > 1:297241/1‑251 (MQ=255) ccTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAggg < 1:52394/246‑1 (MQ=255) ccTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGtcat > 1:543302/1‑250 (MQ=255) ccTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGacat > 1:864086/1‑250 (MQ=255) aCCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAg > 1:173882/1‑250 (MQ=255) ccATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCg < 1:135433/251‑1 (MQ=255) ccATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCg < 1:698282/251‑1 (MQ=255) aTACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGAt > 1:534188/1‑251 (MQ=255) tACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATc < 1:543224/251‑1 (MQ=255) aaGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAgg < 1:875140/249‑1 (MQ=255) gTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGatat > 1:505821/1‑251 (MQ=255) ggCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAAt > 1:515120/1‑204 (MQ=255) aTGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTaa > 1:826955/1‑187 (MQ=255) tGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACgg < 1:410561/251‑1 (MQ=255) gTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAgg < 1:580333/225‑1 (MQ=255) gTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTa > 1:739448/1‑251 (MQ=255) aGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTtta < 1:631918/137‑1 (MQ=255) gtgtGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGAt < 1:655442/211‑1 (MQ=255) gggCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGt > 1:14958/1‑242 (MQ=255) aTCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTc > 1:296779/1‑96 (MQ=255) ccATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGAc > 1:253371/1‑202 (MQ=255) cATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGCACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAg > 1:71476/1‑193 (MQ=255) gTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCa < 1:592874/137‑1 (MQ=255) ccGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAg < 1:493680/231‑1 (MQ=255) ccGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAAttt > 1:668725/1‑251 (MQ=255) gCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAAtttcctttc > 1:457151/1‑250 (MQ=255) ccTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTtc > 1:760502/1‑229 (MQ=255) ggAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAATTTCCTTTCCTTAGTTc < 1:575881/249‑1 (MQ=255) gCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAg > 1:158135/1‑212 (MQ=255) gCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAATTTCCTTTCCTTAGTTCatat > 1:477889/1‑250 (MQ=255) cTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAAttt > 1:199858/1‑229 (MQ=255) gATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAAtt < 1:640255/226‑1 (MQ=255) tgtgAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTTGCGATCGTCCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTtctc < 1:85468/213‑1 (MQ=255) ttttGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAATTTCCTTTCCTTAGTTCATATCGGCGTAACGGAAAACGGCGTTATcc < 1:524024/251‑1 (MQ=255) | AAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTG‑TTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTCCGAATTAGGGTCATCACTAGCGATCGACCAAAAGGATATTTAAAAATTGCATTTTACGGTATCGTCGGTCAGGAGTGTTTCTCCTTGTTTAATTTCCTTTCCTTAGTTCATATCGGCGTAACGGAAAACGGCGTTATCC > 1/577173‑577647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |