| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,804,737 | (T)7→8 | intergenic (+22837/+30647) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,804,730 | 1 | . | T | 98.9% | 265.9 / ‑3.5 | 89 | intergenic (+22830/+30654) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (46/42); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
CCCGACTAAAGTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGC‑TTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCTATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAGTTCCATTATCTCCTCCC > 1/1804497‑1804950 | cccGACTAAAGTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAAtt > 1:30458/1‑251 (MQ=255) cGACTAAAGTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCg > 1:350457/1‑251 (MQ=255) gACTAAAGTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCTGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCgg > 1:447883/1‑251 (MQ=255) aCTAAAGTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACATGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCggg > 1:464818/1‑251 (MQ=255) gTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGa > 1:587526/1‑250 (MQ=255) tCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACt < 1:512128/251‑1 (MQ=255) cTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCggggg < 1:65302/245‑1 (MQ=255) cTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAAt < 1:808503/249‑1 (MQ=255) gctTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCaa > 1:866749/1‑251 (MQ=255) gctTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCaa > 1:834655/1‑251 (MQ=255) gTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCgg > 1:679587/1‑251 (MQ=255) aaCTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAag < 1:64434/251‑1 (MQ=255) cgTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGgcg > 1:611898/1‑251 (MQ=255) gTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAacac > 1:714357/1‑242 (MQ=255) tCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGcc < 1:362309/251‑1 (MQ=255) cGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAg < 1:623917/251‑1 (MQ=255) tttCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAAtt > 1:547444/1‑251 (MQ=255) gAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTc < 1:30878/167‑1 (MQ=255) gAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTg > 1:44757/1‑251 (MQ=255) gAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTg > 1:881489/1‑251 (MQ=255) aTAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGa > 1:642746/1‑250 (MQ=255) aTAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGACATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGAc < 1:735083/251‑1 (MQ=255) gtgtTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGc > 1:260460/1‑250 (MQ=255) ccATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCAGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAatat < 1:228027/250‑1 (MQ=255) aaCGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAAcc < 1:256941/251‑1 (MQ=255) aCGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAAc < 1:123851/163‑1 (MQ=255) cAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCGTCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAatat > 1:425810/1‑228 (MQ=255) aTGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCAt < 1:155757/199‑1 (MQ=255) gTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGc < 1:660336/201‑1 (MQ=255) gTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCa > 1:827853/1‑251 (MQ=255) gTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCa > 1:116569/1‑251 (MQ=255) cTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAAc < 1:373988/154‑1 (MQ=255) gaAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAatat > 1:792053/1‑213 (MQ=255) aaaaTTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCAt < 1:808910/249‑1 (MQ=255) aaaaTTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:472688/251‑1 (MQ=255) aaaaTTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:660191/251‑1 (MQ=255) aaaaTTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:117606/251‑1 (MQ=255) tgtgCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCtt < 1:671551/251‑1 (MQ=255) gtgCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAAc < 1:737451/134‑1 (MQ=255) gtgCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGAc < 1:844367/190‑1 (MQ=255) gtgCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTa > 1:149927/1‑251 (MQ=255) gCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAag > 1:586542/1‑147 (MQ=255) gCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAAc > 1:387749/1‑218 (MQ=255) gCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGttt > 1:377652/1‑234 (MQ=255) gCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGt > 1:848883/1‑244 (MQ=255) cATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAAc < 1:608044/135‑1 (MQ=255) cATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:484148/238‑1 (MQ=255) cATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTcc < 1:898010/245‑1 (MQ=255) cATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTa > 1:56397/1‑248 (MQ=255) cATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTg < 1:899356/251‑1 (MQ=255) cATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTg < 1:228672/251‑1 (MQ=255) tatatCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAatat > 1:691888/1‑197 (MQ=255) tatatCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATc < 1:856288/200‑1 (MQ=255) atatCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGttt > 1:845239/1‑251 (MQ=255) tatCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:896665/234‑1 (MQ=255) atCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGt > 1:526197/1‑238 (MQ=255) caccacATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGAc < 1:738770/251‑1 (MQ=255) caccacATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGAc < 1:777960/251‑1 (MQ=255) ccacatccacatTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATcc > 1:638884/1‑193 (MQ=255) catccacatTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAac < 1:773698/140‑1 (MQ=255) catccacatTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAatat > 1:733511/1‑186 (MQ=255) atccacatTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:209973/224‑1 (MQ=255) tccacatTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAAt < 1:125815/251‑1 (MQ=255) ttCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCAc < 1:312193/191‑1 (MQ=255) ttCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc < 1:456737/217‑1 (MQ=255) ttCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATg < 1:242770/236‑1 (MQ=255) ttCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAgagg > 1:224582/1‑251 (MQ=255) ttCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGAC‑ACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAgagga > 1:869022/1‑251 (MQ=255) aTCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATa < 1:38371/251‑1 (MQ=255) tCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAgagg < 1:832182/245‑1 (MQ=255) gCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTg > 1:679156/1‑220 (MQ=255) gCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTg > 1:547780/1‑220 (MQ=255) cGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCa > 1:820947/1‑251 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCAt < 1:270379/136‑1 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATcc > 1:640643/1‑167 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAgagg > 1:574952/1‑236 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAg > 1:797134/1‑251 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAg > 1:448883/1‑251 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAg > 1:483777/1‑251 (MQ=255) atatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAg > 1:546513/1‑251 (MQ=255) tatCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAGt > 1:139820/1‑251 (MQ=255) cGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTg > 1:362547/1‑209 (MQ=255) aaTCACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAatat < 1:55051/153‑1 (MQ=255) cACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAGTTCCATTAtctc > 1:848269/1‑250 (MQ=255) cACCGGTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAGTTCCATTAtctc > 1:856736/1‑250 (MQ=255) gggTAAAACGTTTAAAACCAAATTCTTTTGC‑TTTTTCTTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGaa < 1:400405/98‑1 (MQ=255) ggTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATAc > 1:471712/1‑185 (MQ=255) gTAAAACGTTTAAAACCAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCGATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAGTTCCATTATCTCCTccc < 1:552354/250‑1 (MQ=255) ccAAATTCTTTTGCTTTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAAc < 1:543820/148‑1 (MQ=255) | CCCGACTAAAGTCTTAACCCCAGCTTTTTTTGCTGCTTTGTACATTAACTTGGCATCTGCCGCCGTCAATGCCAGCGGTTTTTCGGAATAAACGTGTTTGCCATTTGCAATGGCCGCCAACGCAATGTCTTTATGGAGAAAATTCGGTGTGCATATATCCACCACATCCACATTCGGATCCTGCACGATATCACGCCAATCACCGGTAAAACGTTTAAAACCAAATTCTTTTGC‑TTTTT‑TTCCGCTAATTCGGGGGTGACTTCCGCCAAATACTCTAAAACCAACTCGGCATCAAGAGGAAACACCGTCGGCGCCTGAGCATAAGCAATTGCGTGACAACGCCCAATATATCCCGTTCCCACTAAACCTATACGCACTTGTTTCATACTATGTCCTTACTGTTTATGACATAAAATAAGAGGAGATAAGTCCTCAAGTTCCATTATCTCCTCCC > 1/1804497‑1804950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |