| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,360,672 | +T | intergenic (+221542/+32639) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,360,672 | 1 | . | T | 98.5% | 189.4 / NA | 69 | intergenic (+221542/+32639) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base T (41/26); minor base G (0/1); total (41/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCGGAATTAAACACCATGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCG‑‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCCCGCCGGACAGCGTTCTGACCGCCTGTCG > 1/1360435‑1360913 | cgcgGAATTAAACACCATGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGAcc < 1:716929/250‑1 (MQ=255) aTTAAACACCATGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATActc < 1:400218/251‑1 (MQ=255) aTTAAACACCATGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATAct > 1:652687/1‑250 (MQ=255) aaaCACCATGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTAt < 1:421942/251‑1 (MQ=255) tGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACata > 1:350016/1‑251 (MQ=255) tGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACata > 1:47379/1‑251 (MQ=255) tGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACata > 1:260073/1‑251 (MQ=255) ttGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAAttt < 1:491817/251‑1 (MQ=255) gATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTAt < 1:709358/228‑1 (MQ=255) aGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTAt > 1:785532/1‑222 (MQ=255) gTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTc < 1:780745/231‑1 (MQ=255) cAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAAc < 1:842841/251‑1 (MQ=255) gCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGgaga > 1:459448/1‑251 (MQ=255) cccAAGGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTCCCCATCATCGTCTCTCCTTCCCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCCCCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCAAAAT‑CGGAAAAAATAAACAGCACCGCCACATTTTGCTTGgaga < 1:202282/250‑1 (MQ=255) cAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑catgcat > 1:456771/1‑163 (MQ=255) cAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑catgca > 1:240602/1‑162 (MQ=255) cAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACat < 1:756597/184‑1 (MQ=255) tAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTtgatg > 1:60289/1‑251 (MQ=255) aGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAg > 1:732703/1‑251 (MQ=255) gTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCgg < 1:571895/165‑1 (MQ=255) gTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGAc > 1:701543/1‑167 (MQ=255) gTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATaaa > 1:869649/1‑249 (MQ=255) ttCACGTTTATCTTGAATCAGTTTCAGCATCAATTTCCCCATCATCGTCTCTCTTTCCCCGTGCGTACTGCCGAACGCCATTTGCATAATTTTGTTGTTATTAATCGCCTCACCGACCAAAGAATGGTTATTTTGCCCGT‑CATGAATGACCAATCCTCTATCGAACATATGTTCAATTTTTTCTAAAT‑CGGAAAAAAAAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAatat < 1:701615/251‑1 (MQ=255) aTCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACAttt > 1:826241/1‑208 (MQ=255) cggcatcattttcccaatctgcGTCTCTCCTTACCCGGCCTTACTGCCGAACGCAATTTGCATGATATTGTTGTTATTAACCCCCTCACCGACAAAAGAGTGGATAA‑TTGCCCGATGATGCAGGACAAATCCTCTATCGGAAATATGTTAAATTTCTTC‑AAATGCGGAAAAAAAAAAAAGCGCCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:572048/230‑1 (MQ=255) cAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCcaca > 1:328815/1‑250 (MQ=255) aaGCATCATTTTCCCCATCCTCGTCTCTCCTTCCCCGTGCGTACTGCCGACCGCCATTTGCATGATATTGTTGGTATTAATCGCCTCCCCGACCAAAGAATGGCTAATTTCCCCGT‑CATGCATGACCAATACTCTAGCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAAAAAAAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:657607/250‑1 (MQ=255) catcatTTTTCCCATCATCGTCTCTCCTTCCCCGTGCTTACTGCCGACCGCCATTTGCATGATATTGTTGGTATTAATCGCTTCACCGACCAAAGAATGGCTATTTTGCCCGT‑CATGCATGACAAATACTCTATCGGATATATGTTAAATTTCTTCAAAAT‑CGGAAAAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:889346/248‑1 (MQ=255) cataaaTTTCCCCATCATCGTCTCTCCTTCCCCGTGCTTCCTGCCGAACGCCTTTTGCATGATATTGTTGGTATTAACCCCCCAACCGCCAAAAGAA‑GGGTTATTTGCCCGGTAATGCAGGCCAAATCCTCTATGGGAAATATTTTCATTTTTTTCAAACT‑CGGAAAAAAAAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:186862/244‑1 (MQ=255) aaaTTTCCCCATCATCGTCTCTCCTTCCCCGGGCGTACTGCCAACCGCCATTTGCATGATATTGTGGGTATTAATCGCCTCCCCGACCAAAGAAGGGTTAATTTCCCCGT‑AATGCATGACCAATACTTTATCGGACATATGTTCATTTTCTTCAAAAT‑CGGAAAAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:657982/244‑1 (MQ=255) tcGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATAttttt > 1:671054/1‑190 (MQ=255) cGTCTCTCCTTCCCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCCCCGACAAAAGAATGGCTAATTTGCCCGT‑CATGCATGACAAATACTCTATCGGACATATGTTCATTTTCTTCTAAAT‑CGAAAAAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:25165/230‑1 (MQ=255) cGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCAcaa > 1:593250/1‑251 (MQ=255) tctctcCTTACCCGTGCGTACTGCCGAACGCAATTTGCATGATATTGTTGTTATTAATCCCCTCCCCGACCAAAGAATGGTTATTTTGCCCGT‑CATGCATGACAAATACTCTATCGGACATATGTTCAATTTTTTCTAAAT‑CGGAAAAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCAcaatc < 1:186422/251‑1 (MQ=255) ctcCTTCCCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAACCGCCTCCCCGACAAAAGAATGGCTATTTTCCCCGT‑CATGCATGACCAATCCTCTATCGGACATATGTTCAATTTCTTCAAAAT‑CGGAAAAAAAAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:636130/225‑1 (MQ=255) ctcCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTGATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATAc > 1:169845/1‑106 (MQ=255) ctcCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATAc < 1:777211/106‑1 (MQ=255) ctcCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACata > 1:122671/1‑119 (MQ=255) ctcCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATc > 1:191796/1‑220 (MQ=255) ctcCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACAAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAAAAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAat < 1:146817/199‑1 (MQ=255) ctcCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCCCCTCACCGACCAAAGAATGGTTAATTTGCCGGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑GGGAAAAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac < 1:804570/225‑1 (MQ=255) cgggCGTACTGCCGAACGCCATTTGCATGATTTTTTTGGTATTAATCGCCCCCCCGACCAAAGAATGGTTAATTTGCCCGT‑CATGCAGGACCAATACTCTATCGGACATTTGTTCATTTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACAcc < 1:489612/214‑1 (MQ=255) cGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGa > 1:305808/1‑251 (MQ=255) gTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCgg > 1:173079/1‑221 (MQ=255) gCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCa > 1:218013/1‑251 (MQ=255) cgcgagctctatgtgaaTGATTTTGTTGTTTTTAATCGCCTCACCGACAAAAGAATGGATATTTTCCCCGT‑CATGTGTAACAAATACTCTAACGGAAATATGTTAATTTTCTTCAAAAG‑GGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACAt < 1:249964/184‑1 (MQ=255) aaCGCCATTTGCATGATATTGTTGGTATTAACCGCCTCCCCGACAAAAGAATGGTTATTTTGCCCGT‑CATGCATGACCAATCCTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGac < 1:536570/250‑1 (MQ=255) ccATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATc > 1:26121/1‑175 (MQ=255) ccATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac > 1:494565/1‑198 (MQ=255) ccATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAAc > 1:649020/1‑227 (MQ=255) ccATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTg > 1:876854/1‑251 (MQ=255) ccATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTg > 1:700024/1‑251 (MQ=255) atatTGTTGGTATTAATCGCCTCCCCGACCAAAGAATGGCTATTTTGCCCGT‑CATGCATGACAAATACTCTATCGGACATATGTTCATTTTCTTCTAAAC‑CGAAAAAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGcc < 1:148416/174‑1 (MQ=255) atatTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac > 1:520186/1‑187 (MQ=255) atatTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATa > 1:306926/1‑214 (MQ=255) atatTGTTGGTATTAATCGCCTCACCGACAAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCAAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAAt < 1:201513/245‑1 (MQ=255) ttgttgGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac > 1:664386/1‑184 (MQ=255) gTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTg > 1:161420/1‑248 (MQ=255) gTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTg > 1:762971/1‑248 (MQ=255) gTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTg > 1:597925/1‑248 (MQ=255) tATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATaaa > 1:209312/1‑150 (MQ=255) tAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGAtt > 1:11104/1‑250 (MQ=255) tCGCCTCACCGACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCccg > 1:529739/1‑251 (MQ=255) gACCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCCCGCCGGACAGCg > 1:314425/1‑251 (MQ=255) aCCAAAGAATGGCTAATTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac > 1:708753/1‑160 (MQ=255) aaaTGGCTAATTTCCCCGT‑CATGCATGACAAATCCTCTATCGGACATTTTTTAATTTTCTTATAAAT‑CGAAAAAAAAAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCCCGCCGGACAGCGTTCTGAc < 1:397458/250‑1 (MQ=255) aaTTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCacac > 1:804159/1‑146 (MQ=255) aTTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCCCGCCGGACAGCGTTCTGACCGCCTGTCg > 1:231763/1‑251 (MQ=255) aTTTGCCCGT‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCCCGCCGGACAGCGTTCTGACCGCCTGTCg > 1:334825/1‑251 (MQ=255) | CGCGGAATTAAACACCATGCTTAACGTTTGCAGATGAAAGCCGTTTCCGACAAAACCTAACAGTAAAAATAACAAGCCAATGGCAATAAGAATGGTCAGTTCACGATTATCCTGAATCAGTTTCAGCATCAATTTTCCCATCATCGTCTCTCCTTACCCGTGCGTACTGCCGAACGCCATTTGCATGATATTGTTGGTATTAATCGCCTCACCGACCAAAGAATGGCTAATTTGCCCG‑‑CATGCATGACCAATACTCTATCGGACATATGTTCAATTTCTTCTAAAT‑CGGAAGAAATAAACAGCACCGCCACATTTTGCTTGGAGATATTTTTGATGAGCTGATAAATATCCGCACGCGCCCCCACATCCACACCGCGTGTCGGCTCGTCCACAATCAATAACGCCGGATCCGCTTCCAGACACTTGGCAATCAACACTTTTTGCTGATTCCCGCCGGACAGCGTTCTGACCGCCTGTCG > 1/1360435‑1360913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |