Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 937,457 Δ1 bp intergenic (‑12740/‑177651) unknown ← / → unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1937,4560T.100.0% 299.4 / NA 70intergenic (‑12739/‑177652)unknown/unknowntRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (40/30);  total (40/30)

TAAGTAATTTCCCCTGTGCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAATTAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCATGTGTGGCATGAGAAACTTCTTGCTG  >  1/937222‑937698
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
taagtaaTTTCCCCTGTGCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTc                                                                                                                                                                                                                                   <  1:672410/251‑1 (MQ=255)
     aaTTTCCCCTGTGCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGc                                                                                                                                                                                                                              <  1:834716/251‑1 (MQ=255)
          ccccTGTGCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCttttt                                                                                                                                                                                                                         >  1:35203/1‑251 (MQ=255)
               gtgCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAAtaagt                                                                                                                                                                                                                                                <  1:365199/224‑5 (MQ=255)
               gtgCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTAtttt                                                                                                                                                                                                                    >  1:209803/1‑251 (MQ=255)
               gtgCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTAtttt                                                                                                                                                                                                                    >  1:221958/1‑251 (MQ=255)
               gtgCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTAtttt                                                                                                                                                                                                                    >  1:19238/1‑251 (MQ=255)
                 gCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTAtttttt                                                                                                                                                                                                                  >  1:711274/1‑251 (MQ=255)
                                                        atCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCa                                                                                                                                                                             >  1:180973/1‑249 (MQ=255)
                                                                 tgAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGcc                                                                                                                                                                  <  1:400859/251‑1 (MQ=255)
                                                                 tgAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGcc                                                                                                                                                                  <  1:822912/251‑1 (MQ=255)
                                                                                acaTAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATa                                                                                                                                                   >  1:573855/1‑251 (MQ=255)
                                                                                  aTAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAgg                                                                                                                                                 <  1:190840/251‑1 (MQ=255)
                                                                                  aTAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTA‑TTTTAAGTAAAATATTCTTACATTTACGATAAATAGGACTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATCTGCCATTTGGACTGGCATAGGt                                                                                                                                                <  1:450401/251‑1 (MQ=255)
                                                                                                aaTCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTg                                                                                                                                   >  1:728255/1‑251 (MQ=255)
                                                                                                                  aTTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCag                                                                                                                              >  1:846056/1‑238 (MQ=255)
                                                                                                                  aTTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACattat                                                                                                                 >  1:357822/1‑251 (MQ=255)
                                                                                                                                    gTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGt                                                                                                                                                <  1:585952/202‑1 (MQ=255)
                                                                                                                                      aaaaTATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACt                                                                                                     >  1:327172/1‑243 (MQ=255)
                                                                                                                                           atTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATtgcgctgcgc                                                                                                                                                                                                  >  1:762432/1‑145 (MQ=255)
                                                                                                                                            ttCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTCATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGtat                                                                                                                                                                       <  1:326407/171‑1 (MQ=255)
                                                                                                                                                          aTAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCa                                                                                                                                                                 <  1:574075/163‑1 (MQ=255)
                                                                                                                                                          aTAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACg                                                                         >  1:634648/1‑251 (MQ=255)
                                                                                                                                                            aaaTAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGtat                                                                                                                                                                       >  1:287250/1‑155 (MQ=255)
                                                                                                                                                            aaaTAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGcc                                                                                                                                                                  <  1:469502/160‑1 (MQ=255)
                                                                                                                                                            aaaTAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTAGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGa                                                                        >  1:453235/1‑250 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGt                                                                                                                                                                                                                >  1:377751/1‑109 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAATTATTCTGCTCGGCACTGtat                                                                                                                                                                       <  1:61115/150‑1 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTc                                                                                                                                                                                      <  1:627670/135‑1 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGcc                                                                                                                                                                  >  1:879937/1‑155 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGt                                                                                                                                                >  1:627443/1‑173 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGgtg                                                                                                           >  1:657520/1‑210 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          <  1:708108/243‑1 (MQ=255)
                                                                                                                                                                 ggATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCg                                                                  >  1:57910/1‑251 (MQ=255)
                                                                                                                                                                   aTTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGc                                                                 <  1:458985/250‑1 (MQ=255)
                                                                                                                                                                     tATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAAt                                                                                                                                                                                                                                                    >  1:224161/1‑70 (MQ=255)
                                                                                                                                                                      aTCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGcg                                                             >  1:579555/1‑251 (MQ=255)
                                                                                                                                                                       tCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAAt                                                                                                                                                                                                                                                    <  1:446539/68‑1 (MQ=255)
                                                                                                                                                                       tCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGtat                                                                                                                                                                       <  1:780920/144‑1 (MQ=255)
                                                                                                                                                                       tCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGc                                                                                                                                                                   <  1:530331/148‑1 (MQ=255)
                                                                                                                                                                       tCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACat                                                                                                                    >  1:767752/1‑195 (MQ=255)
                                                                                                                                                                                 ggTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGcc                                                                                                                                                                  >  1:618946/1‑139 (MQ=255)
                                                                                                                                                                                 ggTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAg                                                  >  1:759094/1‑251 (MQ=255)
                                                                                                                                                                                 ggTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTAAGCAGAGTTTTACATTATTTGGTGTCTAc                                                                                                      >  1:450229/1‑199 (MQ=255)
                                                                                                                                                                                    tATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCAc                                               <  1:397565/251‑1 (MQ=255)
                                                                                                                                                                                             cATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTgg                                       <  1:875634/250‑1 (MQ=255)
                                                                                                                                                                                              aTTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCAc                                               >  1:663602/1‑241 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACat                                                                                                                    <  1:826537/170‑1 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          <  1:396404/212‑1 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          <  1:215189/212‑1 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          >  1:683171/1‑212 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          >  1:700398/1‑212 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACt                                                                      >  1:855966/1‑216 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTg                                                               <  1:482872/223‑1 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTa                                   >  1:200810/1‑251 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTa                                   >  1:138616/1‑251 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTCTTCGATTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGt                                                                                                                           <  1:394548/163‑1 (MQ=255)
                                                                                                                                                                                                tAACTATAGTGGGAGGAGTATTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          >  1:117478/1‑212 (MQ=255)
                                                                                                                                                                                                   cTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTAc                                                                                                      >  1:818758/1‑181 (MQ=255)
                                                                                                                                                                                                   cTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGtt                                          >  1:127085/1‑241 (MQ=255)
                                                                                                                                                                                                   cTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTAttt                                >  1:501322/1‑251 (MQ=255)
                                                                                                                                                                                                   cTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTAttt                                >  1:769607/1‑251 (MQ=255)
                                                                                                                                                                                                        gTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGc                                                                                                                                                                              <  1:741696/104‑1 (MQ=255)
                                                                                                                                                                                                         tGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCAtg                          <  1:323334/251‑1 (MQ=255)
                                                                                                                                                                                                         tGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCAtg                          <  1:209227/251‑1 (MQ=255)
                                                                                                                                                                                                         tGGGAGGAGTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCAtg                          <  1:173734/251‑1 (MQ=255)
                                                                                                                                                                                                                 gTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGtat                                                                                                                                                                       >  1:869197/1‑102 (MQ=255)
                                                                                                                                                                                                                 gTCTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCATGTGTGGCAt                  >  1:900224/1‑251 (MQ=255)
                                                                                                                                                                                                                 gTCTTAGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCATGTGTGGCAt                  >  1:122881/1‑251 (MQ=255)
                                                                                                                                                                                                                   cTTCGGTTCATCAATGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCATGTGTGGCATga                >  1:303924/1‑251 (MQ=255)
                                                                                                                                                                                                                                 tGTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCATGTGTGGCATGAGAAACTTCTTGCTg  <  1:564837/251‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATAc                                                                          <  1:698512/178‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTAAAAA‑TAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCg                                     <  1:834219/215‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
TAAGTAATTTCCCCTGTGCTATATATGGCGCCGGAAACGGGCGCCATATTTTTTATATCTCACTGTGAAACTTGAAGACAACATAAAATGAGGAAAAATCTGATTACAACCGCGATTTAAAGTTATTTTTAAGTAAAATATTCTTACATTTACGATAAATAGGATTATCCATGCACTGGTTATTCCTGGCATTAACTATAGTGGGAGGAGTCTTCGGTTCATCAATGTTAAAAATTAAGTAGCGGTTTTGTCCGTGCTTTTTATTTTTTGTCTATTGCGCTGCGCTAAAAAATATTCTGCTCGGCACTGTATATGCCATTTGGACTGGCATAGGTTTGGCACCACTTGAGCAGAGTTTTACATTATTTGGTGTCTACTTGTCGATTTCTTCGAATGCTATTATACGACTACCGCTGCGTCGTATTTCAGCACTGGTTTGGCGTATTTTTCATGTGTGGCATGAGAAACTTCTTGCTG  >  1/937222‑937698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑