| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 729,966 | Δ1 bp | intergenic (‑7252/‑57225) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 729,966 | 0 | G | . | 98.4% | 258.7 / ‑4.5 | 63 | intergenic (‑7252/‑57225) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base . (35/27); total (36/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACGCAGGAGGCCTTGTTGGGTTGTGTGTGGGCTGTGCCTGAGGGCGAATTTGGTGACGACGCATTAATTCGTAAAATTCGGCGCGGACAACGTCGTCCACGTGGTAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCACTGCGCATTTCCCGTATCGCCGTGCAACCCAACTGGCAGCAGCGGGGACTGGGGCAACGTTTAATCGAA‑CGAG‑TTAAACAACAACGTGCGGTGGATTTCCTTTCCGTCAGTTTCGGTTACACCCCCGAGCTGCTGGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAGGCAAAGATGCAGGCAGCGGCTGTTATTCCGTAGTGGCATTGTGCCCGCTGACGGAGCGCGGACGGGCGTTGGTGCAACAGGCGGAGCAACAATTTAAACGTAATCTGCCCCTTTCGTTGCACCCG > 1/729727‑730201 | aacgcgggaaaccctgttgGGCTGTGTGTGGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAaacaac < 1:144890/237‑1 (MQ=255) cgcgggaaaccctgttgGGCTGTGTGTGGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAaacaacaa < 1:585054/239‑1 (MQ=255) ggaaaccctgttgGGCTGTGTGTGGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGt < 1:91252/242‑1 (MQ=255) ctgttgGGCTGTGTGTGGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTggg > 1:596187/2‑250 (MQ=255) ctgttgGGCTGTGTGTGGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTggg > 1:308059/2‑250 (MQ=255) gttgGGCTGTGTGTGGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGAtt > 1:386119/1‑251 (MQ=255) gtgtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAaacaacaa < 1:471552/230‑1 (MQ=255) gtgtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGt > 1:297852/1‑233 (MQ=255) gtgtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGAttttctttc > 1:892622/1‑250 (MQ=255) gtgtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGGGGAttttctttc > 1:30271/1‑250 (MQ=255) gtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTTCCGTATCGCCGTGCAGCCCAACTGGCCGCAGCGAGGGCTGGGGCCACGTTTAATCGAACCGA‑‑TTAAACAACAACCTGCGGTGGATTTTCTTTCCGt > 1:16077/1‑251 (MQ=255) gtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAaacaacaa < 1:437368/228‑1 (MQ=255) gtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACg > 1:323252/1‑230 (MQ=255) gtgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGt > 1:598662/1‑251 (MQ=255) tgtgGGCGGTGCCTGAAGGAGGATTTGAGGATGATGCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGATCTTTGCGCATTTCCCGCATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCCGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGACTTTCTTTCCGt > 1:85052/1‑250 (MQ=255) gaaggaggatttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTaca > 1:338311/22‑250 (MQ=255) gatttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGGTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaa > 1:770770/15‑250 (MQ=255) atttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:578174/238‑3 (MQ=255) atttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:836462/238‑3 (MQ=255) atttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:149617/238‑3 (MQ=255) atttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:543915/238‑3 (MQ=255) atttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:217141/238‑3 (MQ=255) atttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGGTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:446276/238‑3 (MQ=255) ttgaggatgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAactg < 1:305880/240‑1 (MQ=255) tgatgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCg < 1:390200/214‑1 (MQ=255) atgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACAcccc < 1:848980/233‑1 (MQ=255) atgCATTAATTCGTCAAATTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac > 1:366912/3‑238 (MQ=255) gtcaaaTTCGACGCGGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:143746/225‑3 (MQ=255) acgcgGACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTAttt < 1:135587/250‑1 (MQ=255) ggACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAaacaacaa > 1:489061/1‑168 (MQ=255) ggACAACGTCGCCTGCGCGGCAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTggg > 1:101494/1‑250 (MQ=255) cgcctgcgcggcaaTTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAg > 1:27586/13‑251 (MQ=255) gcaaTTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGc > 1:569874/3‑154 (MQ=255) tttGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATg < 1:159577/251‑1 (MQ=255) aTGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac > 1:340791/1‑176 (MQ=255) gtTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTAttt < 1:127976/204‑1 (MQ=255) ggATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCg > 1:808127/1‑241 (MQ=255) gATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAactg > 1:287907/1‑161 (MQ=255) gATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTtg > 1:827358/1‑251 (MQ=255) gATTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTtg > 1:85014/1‑251 (MQ=255) aTTGGAACAGGCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTtg < 1:687759/250‑1 (MQ=255) ggCGTGTAAATTGCGTTCTTTGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCtaa > 1:505795/1‑249 (MQ=255) tctttGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCAcgggcggg > 1:369461/5‑250 (MQ=255) ctttGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCt > 1:256412/4‑232 (MQ=255) ctttGCGCATTTCCCGTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGggcgggcg > 1:289964/4‑251 (MQ=255) gTATCGCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGttt < 1:423762/145‑1 (MQ=255) gCCGTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGaaca > 1:602337/1‑248 (MQ=255) gCCGTGCAGCCCAACTAGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGaaca > 1:562036/1‑248 (MQ=255) gTGCAGCCCAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:704660/109‑3 (MQ=255) gcccAACTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTa > 1:635730/2‑251 (MQ=255) cTGGCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGa > 1:504531/1‑156 (MQ=255) ggCAGCAGCGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAAt > 1:168332/1‑251 (MQ=255) cagcGAGGGCTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGc > 1:819576/1‑250 (MQ=255) cgagggcTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGcccc < 1:465959/244‑1 (MQ=255) gggcTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCtaac > 1:888813/4‑185 (MQ=255) ggcTGGGGCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGCCCCTTTc < 1:447361/248‑1 (MQ=255) gggCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGCCCCTTTCATTGc < 1:704049/250‑1 (MQ=255) gggCAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGCCCCTTTCATTGCa > 1:476885/1‑251 (MQ=255) cAACGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGCCCCTTTCATTGTAcc < 1:709743/250‑1 (MQ=255) aCGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACggg > 1:528975/1‑186 (MQ=255) aCGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGCCCCTTTCATTg < 1:881949/244‑1 (MQ=255) aCGTTTAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGAACTGCTCGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAAGCAAAGATGCGGGCAGCGGCTGTTATTCCGTGGTGGCGTTGTGTCCGCTAACGGAGCACGGGCGGGCGTTGGTGCAACGGGCGGAACAACAATTTAAACGCAATTTGCCCCTTTCATTGCACCCg > 1:810302/1‑250 (MQ=255) tAATCGAA‑C‑AGATTAAACAACAACGTGCGGTGGATTTTCTTTCCGTCAGTTTCGGTTACACCCCCGaac < 1:161642/69‑3 (MQ=255) | GACGCAGGAGGCCTTGTTGGGTTGTGTGTGGGCTGTGCCTGAGGGCGAATTTGGTGACGACGCATTAATTCGTAAAATTCGGCGCGGACAACGTCGTCCACGTGGTAATTTGGTGGCGCAAATGTTGTGTTTTCAGGCGGGATTGGAACAGGCGTGTAAATTGCGTTCACTGCGCATTTCCCGTATCGCCGTGCAACCCAACTGGCAGCAGCGGGGACTGGGGCAACGTTTAATCGAA‑CGAG‑TTAAACAACAACGTGCGGTGGATTTCCTTTCCGTCAGTTTCGGTTACACCCCCGAGCTGCTGGCGTTTTGGCAAAAGTGCGGTTTTATTTTGGTGCATTTCAGCGAAGGCAAAGATGCAGGCAGCGGCTGTTATTCCGTAGTGGCATTGTGCCCGCTGACGGAGCGCGGACGGGCGTTGGTGCAACAGGCGGAGCAACAATTTAAACGTAATCTGCCCCTTTCGTTGCACCCG > 1/729727‑730201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |