| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,024,986 | 2 bp→TT | coding (127‑128/669 nt) | unknown → | Cytolethal distending toxin subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,024,986 | 0 | C | T | 100.0% | 187.6 / NA | 68 | P43F (CCC→TTC) | unknown | Cytolethal distending toxin subunit A |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (34/34); total (34/34) | |||||||||||
| * | 1 | 1,024,987 | 0 | C | T | 100.0% | 190.6 / NA | 68 | P43F (CCC→TTC) | unknown | Cytolethal distending toxin subunit A |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (34/34); total (34/34) | |||||||||||
TCCTTTTTTATATATTTTATCTAGTTTTATTTTATCAAAAAAAGGATAAAATAAGAAAAATTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAACCCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAGATAGAACCTGGTAAACAC > 1/1024758‑1025225 || tCCTTTTTTATATATTTTATCTAGTTTTATTTTATCAAAAAAAGGATAAAATAAGAAAAATTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATc < 1:740812/251‑1 (MQ=255) ttttttATATATTTTATCTAGTTTTATTTTATCAAAAAAAGGATAAAATAAGAAAAATTTGCCCTTTTAAATTCAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCaaa < 1:95102/251‑1 (MQ=255) ttATATATTTTATCTAGTTTTATTTTATCAAAAAAAGGATAAAATAAGAAAAATTTGCCCTTTTAAATTTAAGGATGGATCCAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCa < 1:444962/251‑1 (MQ=255) atTTTATCTAGTTTTATTTTATCAAAAAAAGGATAAAATAAGAAAAATTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCa > 1:167520/1‑251 (MQ=255) gATAAAATAAGAAAAATTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCAt < 1:691771/227‑1 (MQ=255) aaaTTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTTGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATTTGATTTTGCACCTAAATCTTCAAAAACACAATTTCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTg > 1:57129/1‑216 (MQ=255) aaaTTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTAt > 1:730822/1‑250 (MQ=255) ttGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCg < 1:666419/251‑1 (MQ=255) cTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGa > 1:125755/1‑251 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCGAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGaa > 1:269057/1‑212 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACAcaattccaaccc < 1:47218/153‑1 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTTCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGAc > 1:337732/1‑217 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGc > 1:787202/1‑173 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGctc < 1:251971/198‑1 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGaa > 1:728594/1‑212 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTa > 1:589054/1‑222 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAAcc < 1:70867/236‑1 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACt < 1:25791/244‑1 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGa > 1:626915/1‑250 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGa > 1:554922/1‑250 (MQ=255) gatCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGa > 1:581461/1‑250 (MQ=255) tCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACtt > 1:816483/1‑251 (MQ=255) gagaGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGTTTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTTTTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATgg > 1:343129/1‑251 (MQ=255) gagGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAAt > 1:461370/1‑182 (MQ=255) aTGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGcc < 1:402602/209‑1 (MQ=255) aaaaaGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGc < 1:406329/251‑1 (MQ=255) aGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCCGCCTGAATCTCAATCTGATTTAGCACCCAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGCATCCCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCa > 1:606889/1‑248 (MQ=255) gTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCa > 1:574018/1‑247 (MQ=255) gTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCa > 1:790418/1‑247 (MQ=255) ccTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGt < 1:513473/251‑1 (MQ=255) gTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTTAACAACACAATTCCAACCCCAACCCCTATTATCAAAAACATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTgg > 1:99461/1‑251 (MQ=255) gTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACtt > 1:677019/1‑216 (MQ=255) tttATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAACATCTTCAATGCCATTGAAATTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGgcg > 1:371060/1‑250 (MQ=255) ttATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTggg < 1:466462/247‑1 (MQ=255) gggTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGAc < 1:544864/212‑1 (MQ=255) ggTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTGTGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACg > 1:483164/1‑251 (MQ=255) ggTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGGGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCAACTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACg > 1:216838/1‑251 (MQ=255) gTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACg > 1:658494/1‑250 (MQ=255) cTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGtt < 1:519548/250‑1 (MQ=255) cTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGtt < 1:553820/250‑1 (MQ=255) ttCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATggg < 1:54173/251‑1 (MQ=255) tCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGACCCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGc < 1:787309/251‑1 (MQ=255) tCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGc < 1:725231/251‑1 (MQ=255) aaaTCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGtt > 1:606986/1‑240 (MQ=255) aaTCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATcc < 1:672096/251‑1 (MQ=255) aCGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATg < 1:339802/172‑1 (MQ=255) gTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAatat < 1:35024/244‑1 (MQ=255) gTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCg > 1:473521/1‑251 (MQ=255) gTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCACCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCAc > 1:470184/1‑189 (MQ=255) tGACTATTCTCAGCCTGAATCTCAATCTGATTTAGTACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGgcg < 1:445837/205‑1 (MQ=255) tGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCg < 1:847554/142‑1 (MQ=255) tGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGc < 1:456814/251‑1 (MQ=255) aCTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATAtt < 1:119404/246‑1 (MQ=255) ttCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCa < 1:143548/76‑1 (MQ=255) ccTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGaaa < 1:20809/251‑1 (MQ=255) aTCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGAc > 1:624855/1‑177 (MQ=255) aTCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGtt < 1:211074/207‑1 (MQ=255) aTCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATcc > 1:157673/1‑219 (MQ=255) aTCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATAtt > 1:879044/1‑250 (MQ=255) cAATCTGATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGc > 1:360365/1‑209 (MQ=255) gATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGc > 1:238602/1‑203 (MQ=255) gATTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATc < 1:499424/208‑1 (MQ=255) aTTTAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTAt < 1:161463/108‑1 (MQ=255) ttAGCACCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAGAt < 1:49226/251‑1 (MQ=255) aCCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAGATAGaa > 1:201862/1‑250 (MQ=255) aCCTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAGATAGAAc < 1:288672/251‑1 (MQ=255) ccTAAATCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGgcg > 1:643035/1‑168 (MQ=255) aTCTTCAACAACACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAg < 1:467567/238‑1 (MQ=255) caacaaCACAATTCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAGATAGAACCTGGTAAacac < 1:512866/251‑1 (MQ=255) || TCCTTTTTTATATATTTTATCTAGTTTTATTTTATCAAAAAAAGGATAAAATAAGAAAAATTTGCCCTTTTAAATTTAAGGATGGATCTAAGGAGAGGTACAATGAAAAAGTTTTTACCTGGTCTTTTATTGATGGGTTTAGTGGCTTGTTCGTCAAATCAACGAATGAGTGACTATTCTCAGCCTGAATCTCAATCTGATTTAGCACCTAAATCTTCAACAACACAACCCCAACCCCAACCCCTATTATCAAAAGCATCTTCAATGCCATTGAATTTGCTCTCTTCATCCAAGAATGGACAGGTATCGCCGTCTGAACCATCAAACTTTATGACTTTGATGGGACAAAATGGGGCACTGTTGACTGTCTGGGCGCTAGCAAAACGCAATTGGTTATGGGCTTATCCCAATATATATTCGCAGGACTTTGGAAATATTCGTAATTGGAAGATAGAACCTGGTAAACAC > 1/1024758‑1025225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |