| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 888,937 | C→T | A14V (GCG→GTG) | unknown → | Transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 888,937 | 0 | C | T | 100.0% | 224.0 / NA | 78 | A14V (GCG→GTG) | unknown | Transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (38/40); total (38/40) | |||||||||||
TGTCCCCCCGTAAACGGAGGAAGGCAAGATATTTAAAAAAATATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGAGGCAATGCCTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCCCTCGTTTGCGCTAAACTAACGGCAATTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGCGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGTGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGACGGTCTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGCGAAAGAATTAACGCAACTGACGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGTTTTTCGCCTCATCAAGATATTATTTC > 1/888702‑889177 | tGTCCCCCCGTAAACGGAGGAAGGCAAGATATTT‑AAAAAATATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAAtt < 1:793962/251‑1 (MQ=39) cccGTAAACGGAGGAAGGCAAGATATTT‑AAAAAATATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGAt > 1:616048/1‑236 (MQ=39) cccGTAAACGGAGGAAGGCAAGATATTT‑AAAAAATATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGc > 1:790940/1‑250 (MQ=255) aCGGAGGAAGGCAAGATATTT‑AAAAAATATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATcc < 1:849332/251‑1 (MQ=255) atttaaaaaaTATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGc < 1:361648/247‑1 (MQ=255) atCAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAg > 1:108388/1‑251 (MQ=255) cAATGAATTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCg < 1:292915/251‑1 (MQ=255) aTTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGccc > 1:749444/1‑220 (MQ=255) aTTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCa < 1:241638/239‑1 (MQ=255) aTTATAATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCg < 1:753180/245‑1 (MQ=255) ataATGTTTCGAACAACTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGc < 1:241559/229‑1 (MQ=255) caacTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAACCTCAATTTTTTCATCTCGAAATTCTTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGAATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGatgg > 1:435030/1‑248 (MQ=255) cTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGttt > 1:317448/1‑249 (MQ=255) cTGTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGttt > 1:364516/1‑249 (MQ=255) gTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATc < 1:296127/193‑1 (MQ=255) gTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGAt < 1:564625/208‑1 (MQ=255) gTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTaa > 1:500241/1‑251 (MQ=255) gTAATACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTaa > 1:14436/1‑251 (MQ=255) aTACCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCg < 1:628819/251‑1 (MQ=255) aCCCGGGGCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCgtg > 1:121391/1‑251 (MQ=255) gggCAATGCTTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAatat < 1:705800/181‑1 (MQ=255) gctttGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATcc < 1:286495/174‑1 (MQ=255) gctttGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGAcc < 1:244246/245‑1 (MQ=255) gctttGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAAt > 1:33380/4‑251 (MQ=255) tttGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGa < 1:109007/250‑1 (MQ=255) gCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGa > 1:629550/1‑149 (MQ=255) gCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCg > 1:358348/1‑202 (MQ=255) gCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGaca > 1:821116/1‑250 (MQ=255) aGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGcc > 1:12296/1‑185 (MQ=255) aGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGatgg < 1:36304/219‑4 (MQ=255) gTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATAATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAgt > 1:721011/1‑251 (MQ=255) tAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAgtg < 1:360668/251‑1 (MQ=255) tAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAgtg < 1:149408/251‑1 (MQ=255) gAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCg > 1:407001/1‑222 (MQ=255) gAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAgtg < 1:283888/249‑1 (MQ=255) aTTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGcc < 1:93422/153‑1 (MQ=255) cTGTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGt < 1:825235/251‑1 (MQ=255) gTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCa < 1:44520/178‑1 (MQ=255) gTCTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGttt > 1:743210/1‑251 (MQ=255) cTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAatat > 1:546378/1‑150 (MQ=255) cTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATcc > 1:16175/1‑152 (MQ=255) cTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGc > 1:106296/1‑155 (MQ=255) cTTTTTATACAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCgtggtgg > 1:828190/1‑218 (MQ=255) ataCAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGaa > 1:725147/1‑230 (MQ=255) ataCAGATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTggaaaaag > 1:776527/1‑245 (MQ=255) gATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATcc < 1:257155/141‑1 (MQ=255) gATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAgtg > 1:138935/1‑228 (MQ=255) gATCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTa > 1:840851/1‑251 (MQ=255) tCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAAcc < 1:401968/198‑1 (MQ=255) tCTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTgga < 1:50440/239‑2 (MQ=255) cTTTATTGGAAATCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTaaag > 1:656090/1‑249 (MQ=255) aaaTCCCTCTTGTTTGCGCTAAACTAACTGCAACTTTTTTCTTGCTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTggcg < 1:704290/251‑4 (MQ=255) tccctcttgTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAGGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGgcgc > 1:121495/9‑249 (MQ=255) tccctcttgTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGa < 1:96341/194‑1 (MQ=255) cctcttgTTTGCGCTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTc < 1:894566/245‑1 (MQ=255) gcgcTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTg > 1:1199/1‑251 (MQ=255) gcgcTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTg > 1:627496/1‑251 (MQ=255) cgcTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTg < 1:522643/250‑1 (MQ=255) cTAAACTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCaa > 1:675624/1‑251 (MQ=255) aaaCTAACTGCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAat > 1:829306/1‑241 (MQ=255) tgCAACTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACtt < 1:817919/250‑1 (MQ=255) acttttttCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGAt < 1:708955/109‑1 (MQ=255) ctctTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTTCCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGa < 1:516361/251‑1 (MQ=255) ctTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCaaaa > 1:111140/1‑225 (MQ=255) ttGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAAccc < 1:835811/251‑1 (MQ=255) gTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAAccc < 1:213540/246‑1 (MQ=255) gTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGc > 1:406125/1‑249 (MQ=255) tATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGatgg > 1:586706/1‑120 (MQ=255) aTGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGa < 1:278926/251‑1 (MQ=255) cAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAg < 1:413429/251‑1 (MQ=255) cTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAGTGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGtttt > 1:458659/1‑251 (MQ=255) cTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGcc > 1:674885/1‑67 (MQ=255) cTCAATTTTTTCATCTCGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGtttt > 1:237060/1‑251 (MQ=255) cGAAATTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGAc < 1:471878/117‑1 (MQ=255) aTTCCTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGa < 1:359210/224‑1 (MQ=255) ccTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGTTTTTCGCCTCATCAAGATATTATTTc < 1:766319/251‑1 (MQ=255) ccTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGTTTTTCGCCTCATCAAGATATTATTTc < 1:194682/251‑1 (MQ=255) ccTACCCAAGTGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGCGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGATGGTTTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGAAAAAGAATTAAAGCAACTGGCGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGTTTTTCGCCTCATCAAGATATTATTTc < 1:662851/251‑1 (MQ=255) | TGTCCCCCCGTAAACGGAGGAAGGCAAGATATTTAAAAAAATATCAATGAATTATAATGTTTCGAACAACTGTAATACCCGAGGCAATGCCTTGCCCTAGGTAGAATTACTGTCTTTTTATACAGATCTTTATTGGAAATCCCCCTCGTTTGCGCTAAACTAACGGCAATTTTTTTCTTACTCTTTTGTCGTTTTATGCAAACTCAATTTTTTCATCTCGAAATTCCTACCCAAGCGAATGATCATAAAATTTTAGCCAATATCCTGCCCGGTGCGGATAGCCTCGCCATTAGCGAAATTGCCGCGCAGTTTGACGGTCTAACCGTGGTGGTGACCAATGACACCCGAAGTGCGGTGCGTTTGGCGAAAGAATTAACGCAACTGACGCCTTCCGAATTATTGCAAAACGTGACTTTTTTCCCCGATTGGGAAACCCTGCCTTATGATAGTTTTTCGCCTCATCAAGATATTATTTC > 1/888702‑889177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |