| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 792,450 | C→T | intergenic (‑66/‑60) | unknown ← / → unknown | hypothetical protein/Uncharacterized protein YjgR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 792,450 | 0 | C | T | 100.0% | 188.3 / NA | 65 | intergenic (‑66/‑60) | unknown/unknown | hypothetical protein/Uncharacterized protein YjgR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (34/31); total (34/31) | |||||||||||
ATCCACACCGCCATGATGGGCTTTCAATCCCACATCATTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGCACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCGGTATTTTTAGTGGATGTAAAAGG > 1/792208‑792688 | aTCCACACCGCCATGATGGGCTTTCAATCCCACATCATTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTAt > 1:182136/1‑251 (MQ=255) gCCATGATGGGCTTTCAATCCCACATCATTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAata > 1:348740/1‑251 (MQ=255) ccATGATGGGTTTTCAATCCCACATCATTGCCTTCCGCACAAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAatat < 1:54565/251‑1 (MQ=255) tttaaaTCCCACATCATTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGaaa < 1:246113/247‑1 (MQ=255) ttCAATCCCACATCATTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTAttt > 1:664873/1‑231 (MQ=255) ttCAATCCCACATCATTGCCTTCCGCACCAAGTGAGTAAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAAt < 1:390814/251‑1 (MQ=255) tcatTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGtcat > 1:170526/1‑250 (MQ=255) cTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAgg > 1:121888/1‑251 (MQ=255) ccGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTTCGAATGGCGCTTTGATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAac < 1:869319/251‑1 (MQ=255) aaGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAAc < 1:360627/251‑1 (MQ=255) tgagtgaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACAt < 1:836279/250‑1 (MQ=255) tgagtgaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACAt < 1:265806/250‑1 (MQ=255) tgaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCaa < 1:569972/250‑1 (MQ=255) tgaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCaa < 1:416552/250‑1 (MQ=255) gaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTAt > 1:12659/1‑218 (MQ=255) gaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAac > 1:530327/1‑236 (MQ=255) gaATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAata > 1:245684/1‑251 (MQ=255) aaTTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAatat < 1:859138/251‑1 (MQ=255) cACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAat > 1:479128/1‑184 (MQ=255) cTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTa < 1:645120/167‑1 (MQ=255) cTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATg > 1:525795/1‑208 (MQ=255) cTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACt < 1:115010/219‑1 (MQ=255) tttCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAatat > 1:805994/1‑213 (MQ=255) ttCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAac > 1:21847/1‑196 (MQ=255) ttCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAatat < 1:120296/212‑1 (MQ=255) ttCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCAtt > 1:830012/1‑251 (MQ=255) cATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTc < 1:549418/251‑1 (MQ=255) aTACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTc > 1:686254/1‑250 (MQ=255) cAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAac > 1:486476/1‑190 (MQ=255) ccGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATgg > 1:868362/1‑251 (MQ=255) aaGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGc > 1:373353/1‑250 (MQ=255) ggTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAac < 1:666535/172‑1 (MQ=255) ggTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAAc < 1:874085/179‑1 (MQ=255) ggTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTc < 1:410351/194‑1 (MQ=255) ggTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCa > 1:302140/1‑250 (MQ=255) ggTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGT‑AAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACt > 1:217476/1‑192 (MQ=255) cTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGaa > 1:585660/1‑165 (MQ=255) cTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAac < 1:179229/166‑1 (MQ=255) cTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGc > 1:403669/1‑177 (MQ=255) cTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTa > 1:119699/1‑251 (MQ=255) aaaTTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGa > 1:488554/1‑135 (MQ=255) aaTTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACt < 1:580672/157‑1 (MQ=255) tGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACt < 1:106775/145‑1 (MQ=255) tGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACg > 1:572074/1‑250 (MQ=255) tGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGc < 1:68255/251‑1 (MQ=255) tGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGc < 1:221680/251‑1 (MQ=255) gCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCt < 1:628715/245‑1 (MQ=255) gCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCa > 1:94135/1‑251 (MQ=255) cACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAat < 1:543732/82‑1 (MQ=255) cACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACt > 1:883185/1‑139 (MQ=255) cTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAAcc > 1:811843/1‑231 (MQ=255) cccTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAAt > 1:776697/1‑199 (MQ=255) ttttCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAg < 1:465694/251‑1 (MQ=255) tCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGtga > 1:713499/1‑251 (MQ=255) tCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGc < 1:504408/251‑1 (MQ=255) gAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGc > 1:370072/1‑170 (MQ=255) gAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGtgatg < 1:477251/240‑1 (MQ=255) gAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCg > 1:444978/1‑251 (MQ=255) gAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAAGGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAAt < 1:883200/220‑1 (MQ=255) gAATTATACCGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTCATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGtg < 1:424036/237‑1 (MQ=255) ccGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCGGTAttttt > 1:668238/1‑251 (MQ=255) cGTAAAAACAACTTATTTTTTGACCGTACTTCTATTTTTAAatat < 1:842520/45‑1 (MQ=255) aaaaCAACTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCGGTATTTTTAGTgg < 1:622778/251‑1 (MQ=255) cTTATTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCGGTATTTTTAGTGGATGTaaa > 1:888526/1‑251 (MQ=255) aTTTTTTGACCGTACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCGGTATTTTTAGTGGATGTAAAAgg > 1:784225/1‑251 (MQ=255) | ATCCACACCGCCATGATGGGCTTTCAATCCCACATCATTGCCTTCCGCACCAAGTGAGTGAATTTTCACCGCCTCCACCGGCACTTTGCGAATGGCGCTTTCATACAGCGAACCGTCGGCAAAGGTAAGCTGTTGCACCTTGCCGATTTTAATGATCAAAATTTCTGCCGTTGCCATCACTTTCCCTGTTATTTTCTAAAATCTGCGGAATTATACCGTAAAAACAACTTATTTTTTGACCGCACTTCTATTTTTAAATATCATGCGGGAAATTTATCCGTCATCAATCAGGAACACTCAACATGCAATATTTACTCGCCCAAACCGAACAAAATCAACAATTCGGCATTTCCGCCAAAATGGCAAACCGCCACGGCTTAATCGCCGGCGCCACTGGAACCGGTAAAACCGTCACCTTACGCAAAATGGCGGAAACCTTCAGTGATGACGGCGTGCCGGTATTTTTAGTGGATGTAAAAGG > 1/792208‑792688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |