Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 777,646 T→C I731V (ATT→GTT)  unknown ← Alanyl‑tRNA synthetase (EC 6.1.1.7)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1777,6460TC100.0% 244.7 / NA 81I731V (ATT→GTT) unknownAlanyl‑tRNA synthetase (EC 6.1.1.7)
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (30/51);  total (30/51)

ATTAACTTTTTCATCTACTACGGAAGCAAATACAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAATCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCG  >  1/777401‑777890
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
aTTAACTTTTTCATCTACTACGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTa                                                                                                                                                                                                                                                  <  1:744794/250‑1 (MQ=255)
 ttAACTTTTTCATCTACTACGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATc                                                                                                                                                                                                                                                <  1:441755/251‑1 (MQ=255)
   aaCTTTTTCATCTACTACGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCg                                                                                                                                                                                                                                              <  1:283252/251‑1 (MQ=255)
    aCTTTTTCATCTACTACGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGt                                                                                                                                                                                                                                             <  1:338756/251‑1 (MQ=255)
        tttCATCTACTACGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATg                                                                                                                                                                                                                                         <  1:641016/251‑1 (MQ=255)
              ctactaCGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTa                                                                                                                                                                                                                                                  <  1:241347/236‑1 (MQ=255)
                actacGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTa                                                                                                                                                                                                                                                  >  1:187825/1‑234 (MQ=255)
                actacGGAAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAAc                                                                                                                                                                                                                                 <  1:628774/251‑1 (MQ=255)
                 ctacGGTAGCAAATAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGaa                                                                                                                                                                                                                                      >  1:284032/1‑245 (MQ=255)
                            aaTAAAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAg                                                                                                                                                                                                                     >  1:668654/1‑251 (MQ=255)
                              taaaaTCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATcc                                                                                                                                                                                                                                               >  1:324187/4‑223 (MQ=255)
                                aaaTCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCTCTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAAc                                                                                                                                                                                                                 <  1:856985/250‑1 (MQ=255)
                                  aTCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTc                                                                                                                                                                                                               <  1:156319/251‑1 (MQ=255)
                                         ccGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCt                                                                                                                                                                                                         <  1:267319/250‑1 (MQ=255)
                                             aCCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGAt                                                                                                                                                                                                    >  1:191963/1‑251 (MQ=255)
                                                    tGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                             <  1:623406/251‑1 (MQ=255)
                                                        ttttCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGAt                                                                                                                                                                                         <  1:609645/251‑1 (MQ=255)
                                                              ggCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTgg                                                                                                                                                                                   >  1:469889/1‑251 (MQ=255)
                                                                  aTCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGaa                                                                                                                                                                                                                                      <  1:63964/196‑1 (MQ=255)
                                                                  aTCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                             >  1:233828/1‑237 (MQ=255)
                                                                      aCCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTaa                                                                                                                                                                           <  1:842009/251‑1 (MQ=255)
                                                                        cATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAAcc                                                                                                                                                                         <  1:479209/251‑1 (MQ=255)
                                                                             aaCGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGt                                                                                                                                                                                  <  1:787268/237‑1 (MQ=255)
                                                                              aCGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGa                                                                                                                                                                   >  1:666745/1‑251 (MQ=255)
                                                                                 tAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATc                                                                                                                                                                                                                              >  1:96118/1‑189 (MQ=255)
                                                                                 tAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                             <  1:410962/222‑1 (MQ=255)
                                                                                          cGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGGATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCAc                                                                                                                                                       <  1:33940/251‑1 (MQ=255)
                                                                                            cTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGt                                                                                                                                                                                                                                             <  1:57793/163‑1 (MQ=255)
                                                                                            cTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTaa                                                                                                                                                                                                                  >  1:389905/1‑190 (MQ=255)
                                                                                            cTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAg                                                                                                                                                             <  1:350212/243‑1 (MQ=255)
                                                                                            cTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCg                                                                                                                                                     >  1:51237/1‑251 (MQ=255)
                                                                                                 aTACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATc                                                                                                                                                                                                                                                <  1:212736/155‑1 (MQ=255)
                                                                                                  tACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGGAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAGCCATTCGATTGCAGTTTCACCGGTAATc                                                                                                                                               <  1:746062/251‑1 (MQ=255)
                                                                                                     cATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGt                                                                                                                                                                                  <  1:303300/213‑1 (MQ=255)
                                                                                                     cATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGc                                                                                                                                             >  1:509939/1‑250 (MQ=255)
                                                                                                      aTCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGc                                                                                                                                             >  1:867213/1‑249 (MQ=255)
                                                                                                               ttgCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATacgac                                                                                                                                  <  1:171706/251‑1 (MQ=255)
                                                                                                                    cAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATac                                                                                                                                     <  1:324498/243‑1 (MQ=255)
                                                                                                                      aTGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGAAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAAtgc                                                                                                                            >  1:350966/1‑250 (MQ=255)
                                                                                                                             aaaCACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTTTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTgccgcc                                                                                                                    <  1:451614/251‑1 (MQ=255)
                                                                                                                                cacCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCa                                                                                                                   >  1:37596/1‑249 (MQ=255)
                                                                                                                                  ccATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGc                                                                                                               <  1:833957/251‑1 (MQ=255)
                                                                                                                                    aTTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCg                                                                                                             <  1:688713/251‑1 (MQ=255)
                                                                                                                                          tttCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCg                                                                                                       <  1:154792/251‑1 (MQ=255)
                                                                                                                                           ttCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGt                                                                                                      >  1:396857/1‑251 (MQ=255)
                                                                                                                                               ccGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTa                                                                                                    >  1:314855/1‑249 (MQ=255)
                                                                                                                                                 gCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTATTGTTTGTCGCCCTTTTTCAACTTTCTTAATTTTATCTTTCAACAGAGAAACCTTATCCGAAAGGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGTTTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGAAATCGCCTCAATACGACGAATGCCTGCCGCCACTCCCGTTTCCGTTACTAt                                                                                                >  1:574235/1‑251 (MQ=255)
                                                                                                                                                    cTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGAtt                                                                                                                                                                                                                         >  1:247568/1‑127 (MQ=255)
                                                                                                                                                               gTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGa                                                                                  >  1:670506/1‑251 (MQ=255)
                                                                                                                                                                tCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACa                                                                                                                                                                                                                                <  1:342078/108‑1 (MQ=255)
                                                                                                                                                                  aTTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                               <  1:399947/251‑1 (MQ=255)
                                                                                                                                                                      ccGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                         >  1:773747/1‑237 (MQ=255)
                                                                                                                                                                       cGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCg                                                                          <  1:246682/251‑1 (MQ=255)
                                                                                                                                                                        ggCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCgg                                                                         >  1:153561/1‑251 (MQ=255)
                                                                                                                                                                           ttGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTa                                                                       >  1:228341/1‑250 (MQ=255)
                                                                                                                                                                              cagcgcagcTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGt                                                                    <  1:176130/250‑1 (MQ=255)
                                                                                                                                                                                            cTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                         >  1:647786/1‑215 (MQ=255)
                                                                                                                                                                                              tttAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCccacc                                                   <  1:134406/251‑1 (MQ=255)
                                                                                                                                                                                              tttAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCccacc                                                   <  1:766407/251‑1 (MQ=255)
                                                                                                                                                                                                 aaTGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACcaca                                                >  1:218069/1‑251 (MQ=255)
                                                                                                                                                                                                  aTGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTCCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACAt                                               <  1:450945/251‑1 (MQ=255)
                                                                                                                                                                                                     tttGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                               <  1:14172/216‑1 (MQ=255)
                                                                                                                                                                                                      ttGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGAt                                                                                                                                                                                         >  1:492452/1‑109 (MQ=255)
                                                                                                                                                                                                       tGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTc                                          <  1:539031/251‑1 (MQ=255)
                                                                                                                                                                                                       tGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTc                                          <  1:847847/251‑1 (MQ=255)
                                                                                                                                                                                                            ctctTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATgg                                     <  1:19069/251‑1 (MQ=255)
                                                                                                                                                                                                                         ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGAt                                                                                                                                                                                                    <  1:590576/79‑1 (MQ=255)
                                                                                                                                                                                                                         ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAAtgcctg                                                                                                                         <  1:707785/154‑1 (MQ=255)
                                                                                                                                                                                                                         ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTAt                                                                                                <  1:130614/179‑1 (MQ=255)
                                                                                                                                                                                                                         ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                         >  1:89647/1‑186 (MQ=255)
                                                                                                                                                                                                                           cTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCAtag                      <  1:114479/251‑1 (MQ=255)
                                                                                                                                                                                                                              aaaTTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                         <  1:527060/181‑1 (MQ=255)
                                                                                                                                                                                                                                   tATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTAcg              <  1:520729/251‑1 (MQ=255)
                                                                                                                                                                                                                                     tCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                               <  1:820480/184‑1 (MQ=255)
                                                                                                                                                                                                                                     tCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCAtag                      <  1:247725/241‑1 (MQ=255)
                                                                                                                                                                                                                                           aaCAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTg      <  1:236098/251‑1 (MQ=255)
                                                                                                                                                                                                                                             cAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                             >  1:743977/1‑66 (MQ=255)
                                                                                                                                                                                                                                             cAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCAt                                                             >  1:836511/1‑194 (MQ=255)
                                                                                                                                                                                                                                             cAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACAt                                               <  1:376625/208‑1 (MQ=255)
                                                                                                                                                                                                                                               gagaAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCg  >  1:34293/1‑251 (MQ=255)
                                                                                                                                                                                                                                                agaAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATc   <  1:532973/249‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
ATTAACTTTTTCATCTACTACGGAAGCAAATACAATCACTGCCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAATCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCG  >  1/777401‑777890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑