| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 56,663 | C→T | P31P (CCG→CCA) | unknown ← | Acyl‑phosphate:glycerol‑3‑phosphate O‑acyltransferase PlsY (EC 2.3.1.n3) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 56,663 | 0 | C | T | 100.0% | 239.6 / NA | 83 | P31P (CCG→CCA) | unknown | Acyl‑phosphate:glycerol‑3‑phosphate O‑acyltransferase PlsY (EC 2.3.1.n3) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (49/34); total (49/34) | |||||||||||
CCTTTGCCGCCTTTAAATTTAAAGAAAATCGGGAAAATATGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCCGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGTTTAACGGTATTTGCGCAAATCGG > 1/56436‑56901 | ccTTTGCCGCCTTTAAATTTAAAGAAAATCGGGAAAATATGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCataa > 1:41560/1‑251 (MQ=255) tttGCCGCCTTTAAATTTAAAGAAAATCGGGAAAATATGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCataata > 1:28156/1‑251 (MQ=255) cTTTAAATTTAAAGAAAATCGGGAAAATATGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCa > 1:580057/1‑251 (MQ=255) aaTATGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAg > 1:427096/1‑250 (MQ=255) atatGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAGTA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAAc > 1:637362/1‑238 (MQ=255) tGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCaa > 1:460830/1‑251 (MQ=255) ccaaaccccccccctaccccccccaTCCCCAATTAAATTTGT‑TTTACCCCAAAAAAAA‑AC‑CCCAACCCCCCC‑GGTAAC‑TTCCTTTTAAAGATGTCGAAAAAAAC‑CCCCGCCAAGGCAATCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAg < 1:315049/229‑1 (MQ=255) ccccgccgcAACCGCCACCATGCCCATTTCAATTTGT‑TTTACCCCAAAAAAAA‑A‑‑CCCCACCCCCCCGGGTAACATGCTTTTA‑AAGATGTCAAAAATAAG‑CCCCGCCAAGGCAACCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCatat < 1:105661/248‑1 (MQ=255) ccccccgcaaccgcccccttGCCCAATTAAAATTGT‑TTAACCCCAAAAAAAA‑AACCCCACCCACACC‑GTAAACATGCTTTTA‑AAGAGGACAAAAATAAG‑CCCCGCCAGGGCAACCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCatat < 1:553854/232‑1 (MQ=255) cgccgcTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaa > 1:192936/1‑251 (MQ=255) ccgcTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa > 1:488288/1‑251 (MQ=255) ccccaacccccaccaTCCCCAATTAAAATTGT‑TTTACCCCAAAAAAAACC‑‑CCCACCCACCCC‑GGAAACATGCTTTTA‑AAGATGTCAAAAAAAAC‑CCCCGCCAGGGCAA‑CCAACCGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa < 1:505732/242‑1 (MQ=255) gCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGCTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCa > 1:66568/1‑251 (MQ=255) aaTTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa > 1:51861/1‑231 (MQ=255) ttCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGa > 1:682612/1‑250 (MQ=255) gtgtTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCAtaataa > 1:158541/1‑172 (MQ=255) tAACCCCAAAAAAAA‑AC‑CCCACCCACACC‑GGTAACATGCTTTTT‑AAGTTGCAAAAAAAAAG‑CCCCGCCAGGGCAACCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGAc < 1:844872/250‑1 (MQ=255) aaaagagaaaaaaaaaaccccacccaCCCC‑GGAAACATGCTTTTA‑AAGATGT‑AAAAAAAAGCCCCCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGAc < 1:682924/233‑1 (MQ=255) ccccAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGgag > 1:562402/1‑251 (MQ=255) ataata‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTc > 1:390048/1‑233 (MQ=255) ataata‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGAc > 1:76093/1‑240 (MQ=255) ataata‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAag > 1:542486/1‑251 (MQ=255) ataata‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAag > 1:800590/1‑251 (MQ=255) ataata‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAag > 1:63632/1‑251 (MQ=255) ataata‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGAAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAag > 1:444875/1‑251 (MQ=255) taata‑a‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAaga > 1:725855/1‑251 (MQ=255) taata‑a‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAaga > 1:410729/1‑251 (MQ=255) ta‑a‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGCTCTGGGGTCTGGCAAGCCGGTGACTCGGCACAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa > 1:747115/1‑204 (MQ=255) a‑a‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCAtaataa > 1:282943/1‑154 (MQ=255) acccccccc‑GGTAACATGCCTTTT‑AAGATGTCGAAAAAAAG‑CCCCGCCAGGGCAATCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaa < 1:580922/189‑1 (MQ=255) aaCCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAg > 1:498322/1‑188 (MQ=255) aCCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGAGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTAt > 1:94765/1‑251 (MQ=255) cccccc‑GGAAACATGCTTTTA‑AAGTTGTCAAAAAAAAG‑CCCCGCAAGGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTg < 1:568764/247‑1 (MQ=255) cacC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTa > 1:675000/1‑251 (MQ=255) cc‑GGTAACATGCTTTTT‑AAGATGTCAAAAATAAG‑CCCCGCCAAGGCAATCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa < 1:224952/191‑1 (MQ=255) gTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTg > 1:389287/1‑244 (MQ=255) acatccctttaaagatgcaaaaaaTAAG‑CCCCGCCAAGGCAATCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGt < 1:161528/231‑1 (MQ=255) gCCTTTT‑AAGAGCTAGAAAAAAAC‑CACCGCGAAGGCAATCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGt < 1:641762/247‑1 (MQ=255) ccTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAg > 1:77580/1‑170 (MQ=255) ccTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa > 1:830959/1‑180 (MQ=255) ccTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGAc > 1:358056/1‑212 (MQ=255) ccTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGgta > 1:143871/1‑251 (MQ=255) gatgtgaaaaaaaggccccGCCAAGGCAACCCAG‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa < 1:499023/155‑1 (MQ=255) tgccaaaaaaaccccccGCCAAGGCAACCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGcc < 1:189521/235‑1 (MQ=255) gtcaaaaaTAAG‑CCCCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGcc < 1:542794/245‑1 (MQ=255) aaTAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCg > 1:702151/1‑169 (MQ=255) ccGCCAGGGCACCCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGc < 1:114514/168‑1 (MQ=255) ccGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGaaa > 1:203548/1‑120 (MQ=255) ccGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGa > 1:148289/1‑251 (MQ=255) aaGGCAACCCAC‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATaac < 1:226645/251‑1 (MQ=255) aGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATaaca > 1:406310/1‑251 (MQ=255) aTCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGAc > 1:546079/1‑176 (MQ=255) ccccccgccGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAacac < 1:568029/248‑1 (MQ=255) cgcccgccGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAac < 1:807037/248‑1 (MQ=255) cgATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAg < 1:262923/251‑1 (MQ=255) cgATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAg < 1:187525/251‑1 (MQ=255) cgATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAg < 1:730493/251‑1 (MQ=255) aTACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGAc < 1:288437/161‑1 (MQ=255) aTACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCa > 1:143017/1‑243 (MQ=255) aCGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaaaa > 1:136394/1‑127 (MQ=255) aCGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAac < 1:270626/237‑1 (MQ=255) aCGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGAt > 1:274251/1‑249 (MQ=255) cGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAg < 1:85666/116‑1 (MQ=255) cGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCtt > 1:323464/1‑251 (MQ=255) ccacGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTAttt < 1:474728/250‑1 (MQ=255) acacGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTAttt < 1:776050/251‑1 (MQ=255) cacGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGAt > 1:886236/1‑243 (MQ=255) ggTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGa > 1:597922/1‑251 (MQ=255) cgcCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTAttt < 1:496867/239‑1 (MQ=255) cgcCGGGGTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGtt > 1:345280/1‑251 (MQ=255) gggTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTAttt < 1:780409/234‑1 (MQ=255) gggTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAATTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGTTTAACg > 1:444505/1‑251 (MQ=255) ggTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAacac > 1:788512/1‑216 (MQ=255) gTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAg > 1:463105/1‑223 (MQ=255) gTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGTTTAACgg < 1:125620/250‑1 (MQ=255) gTTATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGTTTAACGGt > 1:232962/1‑251 (MQ=255) tATGGGAACCGGAGGTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTg < 1:296857/157‑1 (MQ=255) gTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAg < 1:736943/77‑1 (MQ=255) gTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATaaa < 1:273710/85‑1 (MQ=255) gTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAagag < 1:220178/132‑1 (MQ=255) gTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTAc < 1:470588/146‑1 (MQ=255) gTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAg > 1:739871/1‑152 (MQ=255) gTTCTGGGGTCTGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGTTTAACGGTATTTGCGCAAATCgg > 1:217163/1‑250 (MQ=255) | CCTTTGCCGCCTTTAAATTTAAAGAAAATCGGGAAAATATGCCCCAAACACGCCGCTAACGCCACCATGCCCAATTCAAATTGTGTTAACCCCAAATAATA‑A‑‑CCCAACCACACC‑GGTAACATGCCTTTT‑AAGATGTCGAAAATAAG‑CACCGCCAAGGCAATCCAA‑CGCCCGCCGATACGTAACACGTTGGTCGCGCCGGGGTTATGGGAACCGGAGGTTCTGGGGTCCGGCAAGCCGGTGACTCGGCATAATAAAATCGCACCGGAAATGGAACCGAGCAAATAGCTCAATAGCATATAAAAAAGGGCGAAAAGGCTCATTGGACTTCCTATGACTGGAGAAAAAGAGTTCGTCTATTGTACCCAAAGTTGGTAGTATAAGCCCACAAAAATTTTAGGAATAACAACAGGAACACCATGCAAGATCTTATTTTTATCGAAGGTTTAACGGTATTTGCGCAAATCGG > 1/56436‑56901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |