| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 2,093,602 | C→A | A142S (GCT→TCT) | unknown ← | Formate efflux transporter FocA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,093,602 | 0 | C | A | 100.0% | 202.8 / NA | 71 | A142S (GCT→TCT) | unknown | Formate efflux transporter FocA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (35/36); total (35/36) | |||||||||||
ATCCCCATCGGAATCATAAACATATTCGCCACACTGTGCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGCCATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAACCCCCAGGAACCGCCCACAC > 1/2093358‑2093844 | aTCCCCATCGGAATCATAAACATATTCGCCACACTGTGCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTg < 1:247000/250‑1 (MQ=255) tCGGAATCATAAACATATTCGCCACACTGTGCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCg < 1:500645/251‑1 (MQ=255) cATAAACATATTCGCCACACTGTGCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTc > 1:53102/1‑238 (MQ=255) tCGCCACACTGTGCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTaaa > 1:705228/1‑251 (MQ=255) gtgCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAAc < 1:260535/229‑1 (MQ=255) gtgCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATaaaaa > 1:49368/1‑251 (MQ=255) gtgCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATaaaaa > 1:679452/1‑251 (MQ=255) aTCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTAc < 1:563519/251‑1 (MQ=255) aaTCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAAt < 1:55688/251‑1 (MQ=255) gCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTg > 1:3460/1‑251 (MQ=255) aTCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACg > 1:406549/1‑251 (MQ=255) tttCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGacc < 1:464550/251‑1 (MQ=255) cgcgTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCgg > 1:893994/1‑251 (MQ=255) aTGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATa > 1:194406/1‑236 (MQ=255) ccAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCaa > 1:187740/1‑248 (MQ=255) gCAATACACACCATGATATTACATAAAATACCAAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCAt > 1:828591/1‑251 (MQ=255) aaTACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTg > 1:384296/1‑251 (MQ=255) aTACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAAttt > 1:345941/1‑195 (MQ=255) cacCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTg < 1:481021/245‑1 (MQ=255) ccATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATa > 1:643788/1‑212 (MQ=255) ccATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTgt > 1:299808/1‑235 (MQ=255) tGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAAc > 1:514292/1‑136 (MQ=255) tGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGacc < 1:545517/214‑1 (MQ=255) atatTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCAAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTag > 1:298099/1‑241 (MQ=255) tACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAAc < 1:188937/251‑1 (MQ=255) aCATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAAt > 1:1767/1‑247 (MQ=255) aCATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATaa > 1:780339/1‑249 (MQ=255) cATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTc < 1:901093/251‑1 (MQ=255) aTAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCg > 1:837020/1‑251 (MQ=255) tAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCa < 1:891360/227‑1 (MQ=255) tAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCgg > 1:207995/1‑251 (MQ=255) tACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATa < 1:340907/194‑1 (MQ=255) tACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCg > 1:49792/1‑251 (MQ=255) aCCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCg > 1:165190/1‑250 (MQ=255) aCCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCg > 1:877744/1‑250 (MQ=255) cTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAGCGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGcac < 1:98504/251‑1 (MQ=255) cTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGcac < 1:573557/251‑1 (MQ=255) aaGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGCACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTAcc > 1:825737/1‑143 (MQ=255) cAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCTGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCAcacc < 1:279257/249‑1 (MQ=255) gAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCAcacc < 1:319777/247‑1 (MQ=255) aaCGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCAcaccac < 1:536814/248‑1 (MQ=255) aaCGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTAc < 1:243081/251‑1 (MQ=255) cGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCa < 1:10160/251‑1 (MQ=255) cGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCa < 1:894590/251‑1 (MQ=255) cTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATa > 1:654962/1‑251 (MQ=255) ttCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATaa < 1:121309/251‑1 (MQ=255) cAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCa > 1:747581/1‑246 (MQ=255) cAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATg < 1:748328/251‑1 (MQ=255) aTCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTAcc > 1:377520/1‑243 (MQ=255) tCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACACCCCAATTTCGCAGCATTTGAAACGTACTGATACGACCGCCGGCACGGGCAACTGTCGTCATTGTagaaga < 1:356312/211‑1 (MQ=255) cATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGAcc < 1:355705/249‑1 (MQ=255) aTGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATaa < 1:654044/243‑1 (MQ=255) tGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATaa < 1:811043/130‑1 (MQ=255) gTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAAc > 1:34541/1‑216 (MQ=255) aTGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACg < 1:126144/251‑1 (MQ=255) tGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGAGCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACgaga < 1:384511/250‑1 (MQ=255) ttATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGAt < 1:894833/251‑1 (MQ=255) aTGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCAt > 1:254715/1‑183 (MQ=255) gcgcCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGacc < 1:890476/154‑1 (MQ=255) gTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCa > 1:591842/1‑214 (MQ=255) cTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTgtcgtc > 1:137892/1‑168 (MQ=255) cTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAAttt > 1:87217/1‑251 (MQ=255) gAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAAcccc > 1:187154/1‑250 (MQ=255) gAGCCCCCACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAAcccc > 1:354670/1‑250 (MQ=255) cccccACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCa > 1:777049/1‑197 (MQ=255) ccccACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAACCCCCAGGa < 1:231966/251‑1 (MQ=255) ccccACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCATAACGAGAACACGATTCCGCCGACTAATTTCGTCAACCCCCAGGa < 1:155405/251‑1 (MQ=255) ccACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCa < 1:193316/194‑1 (MQ=255) ccACTGCCCGTGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAACCCCCAGGAAc < 1:833555/251‑1 (MQ=255) tGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTGCTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACGCGATCCCGCCGACTAATTTCGTCAACCCCCAGGAACCGCCCacac < 1:96511/250‑1 (MQ=255) tGAGCAGACATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAACCCCCAGGAACCGCCCacac < 1:232433/250‑1 (MQ=255) agcagaCATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGa < 1:843248/188‑1 (MQ=255) | ATCCCCATCGGAATCATAAACATATTCGCCACACTGTGCTCAAACCCTGAGGCCACAAACAAAGCAATCGGTAAAATCATAATGAAGGCTTTATCTGTTAACGTTTTTCCCGCGTATGTCATCCAAATGGCAATACACACCATGATATTACATAAAATACCTAAGCAGAACGCTTCAATCCATGTATGGTGAATCTTATGTTGCGCCGTACTTAAAATGGTGAGCCCCCACTGCCCGTGAGCAGCCATTGTCTGACCGGAAAACCAAATGACTAAAACAATAAAAATTGCGCCGACGAAATTACCACAATAAACTACAACCCAATTTCGCAGCATTTGAAACGTACTGATACGACCACCGGCACGGGCAACTGTCGTCATTGTAGAAGAAGTAAATAACTCGGAGCCGCACACCACTACCATAATGACCCCTAACGAGAACACGATCCCGCCGACTAATTTCGTCAACCCCCAGGAACCGCCCACAC > 1/2093358‑2093844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |