| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 2,058,578 | G→A | A220A (GCG→GCA) | unknown → | Membrane‑bound lytic murein transglycosylase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,058,578 | 0 | G | A | 100.0% | 180.0 / NA | 61 | A220A (GCG→GCA) | unknown | Membrane‑bound lytic murein transglycosylase A |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (36/25); total (36/25) | |||||||||||
CATGACGGGCTATTATTCCCCGGTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCGGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCAGGCGTGCCTTTGGTGCCGATGGCGTCCGTGGCGTCCGACCGCGGTG > 1/2058332‑2058822 | cATGACGGGCTATTATTCCCCGGTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGAc < 1:18310/251‑1 (MQ=255) ggCTATTATTCCCCGGTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACgg > 1:526752/1‑251 (MQ=255) cTATTATTCCCCGGTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACgg > 1:677414/1‑249 (MQ=255) cTATTATTCCCCGGTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACgg > 1:613632/1‑249 (MQ=255) gtattggcaccggcgagtaCCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATgcgg > 1:761215/19‑250 (MQ=255) gTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATgcgg < 1:134455/250‑1 (MQ=255) aTTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATgcggc < 1:881439/248‑1 (MQ=255) ttCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGcggt > 1:516593/1‑250 (MQ=255) gCACCCAACAAGGCAAATTTAACCAACCAATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATAGACAACTTTCTGCTGGGCGTGCAAGACAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTAATTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCctgc < 1:517617/249‑1 (MQ=255) caacaaGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGa < 1:118922/251‑1 (MQ=255) aaGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGAc < 1:663235/251‑1 (MQ=255) accGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCgaaag > 1:852585/1‑251 (MQ=255) accGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTAAGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCgaaag > 1:356309/1‑251 (MQ=255) gATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGa > 1:213230/1‑228 (MQ=255) aTTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCctgctg < 1:795872/222‑1 (MQ=255) tttATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGaaaaa > 1:837063/1‑251 (MQ=255) aTGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATg > 1:595096/1‑251 (MQ=255) aTGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATg > 1:199884/1‑251 (MQ=255) cGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGa < 1:17889/251‑1 (MQ=255) aTTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAAcc > 1:222858/1‑250 (MQ=255) ggTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACg < 1:265314/248‑1 (MQ=255) aTTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGAAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCaa > 1:425341/1‑250 (MQ=255) gagGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGAt > 1:466997/1‑215 (MQ=255) ggTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGtt > 1:704303/1‑251 (MQ=255) gTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATGTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGtt < 1:435562/250‑1 (MQ=255) ggTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATg > 1:280290/1‑186 (MQ=255) ggTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAgcg > 1:440033/1‑251 (MQ=255) gAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAAcc > 1:524991/1‑250 (MQ=255) gAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGAC‑AAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAAccc > 1:216809/1‑250 (MQ=255) ttGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCct > 1:277204/1‑250 (MQ=255) ggCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTag < 1:561051/236‑1 (MQ=255) ggCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCctc > 1:749707/1‑249 (MQ=255) gCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTa > 1:24244/1‑251 (MQ=255) cGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTa < 1:40094/250‑1 (MQ=255) cGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAACGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTa < 1:449434/250‑1 (MQ=255) tACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATg < 1:767414/250‑1 (MQ=255) gCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑t > 1:657127/1‑247 (MQ=255) aTTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCttt > 1:583304/1‑251 (MQ=255) ttCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTag < 1:408454/224‑1 (MQ=255) aTGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGc > 1:787509/1‑213 (MQ=255) cAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATgc > 1:352510/1‑99 (MQ=255) aCTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATGTTTTTCTTTAAAAATGATCCGTa > 1:28935/1‑251 (MQ=255) aCTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTa > 1:764735/1‑250 (MQ=255) aCTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGCGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGcc > 1:680903/1‑204 (MQ=255) cTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATc < 1:397003/245‑1 (MQ=255) ctgctgGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGaaa < 1:615889/251‑1 (MQ=255) ctgctgGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGaaa < 1:656396/251‑1 (MQ=255) gTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTc > 1:453338/1‑142 (MQ=255) gTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACg < 1:771550/179‑1 (MQ=255) gTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTagag < 1:785635/198‑1 (MQ=255) tGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAgg < 1:283136/250‑1 (MQ=255) tGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAgg < 1:855808/250‑1 (MQ=255) gCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCa > 1:335915/1‑251 (MQ=255) gTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAgg > 1:354590/1‑241 (MQ=255) gTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTc > 1:296975/1‑129 (MQ=255) gTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTagag > 1:28839/1‑185 (MQ=255) gTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCAGGCGTg > 1:261850/1‑251 (MQ=255) ttATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCAGGCGTGc < 1:831626/251‑1 (MQ=255) tATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGa < 1:703156/92‑1 (MQ=255) ttACGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCAGGCGTGCCTTTGGTGCCGATGGCGTCCGTGGCGTCCGACCGCGgtg < 1:626249/251‑1 (MQ=255) aCGCAGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCAGGCGTg > 1:577228/1‑209 (MQ=255) | CATGACGGGCTATTATTCCCCGGTGATTCATGCCCGTCGCACCCAACAAGGCAAATTTAACCAACCGATTTATGCACTTCCTTCGAAAAAACGTTTCTCCCGTGCCGAAATTTATGCCGGTGCATTGAGAGGTAAAGGTTTGGAATTGGCGTACAGCGATTCTATGATCGACAACTTTCTGCTGGGCGTGCAAGGCAGTGGTTATGTGGATTTTGGTGAAGGCAATTTGAATTATTTCGCTTACGCGGGACAAAACGGCTACCAATATGCGGCGGTCGGTCGCCTGCTGGTGGAAGACGGTGAAATTCCGAAAGAAAAAATGTCTATTCAGGCAATTCGCGATTGGGCGAATGCCAACCCTTCACGGGTGCAAAGCCTGTTAGAGCGCAACCCCTCTTATG‑TTTTCTTTAAAAATGATCCGTACGGAAAAGTAAAAGGTGCGGCAGGCGTGCCTTTGGTGCCGATGGCGTCCGTGGCGTCCGACCGCGGTG > 1/2058332‑2058822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |