Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 313,119 A→G S30S (AGT→AGC)  unknown ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1313,1190AG100.0% 244.5 / NA 84S30S (AGT→AGC) unknownhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (48/36);  total (48/36)

TCGCTTGACCTTTAATAAGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAACTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTGTTGTAATCGCTTCAATGGCGCACGCGGTTAATAAACGATGTACATTCCCTAAATTACCCCCTGAAATCGTATGAATTTTTGTCGCTAACTCTGGCGA  >  1/312875‑313348
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                     
tCGCTTGACCTTTAATAAGGTTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATg                                                                                                                                                                                                                                 >  1:11421/1‑251 (MQ=255)
tCGCTTGACCTTTAATAAGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATg                                                                                                                                                                                                                                 <  1:860435/251‑1 (MQ=255)
           ttAATAAGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAg                                                                                                                                                                                                                      >  1:319279/1‑251 (MQ=255)
            taataaGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCACTAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAgg                                                                                                                                                                                                                     >  1:446734/1‑251 (MQ=255)
            taataaGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAgg                                                                                                                                                                                                                     >  1:314749/1‑251 (MQ=255)
            taataaGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAgg                                                                                                                                                                                                                     >  1:822142/1‑251 (MQ=255)
             aataaGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGt                                                                                                                                                                                                                    <  1:764550/251‑1 (MQ=255)
             aataaGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGACAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGt                                                                                                                                                                                                                    <  1:449529/251‑1 (MQ=255)
                 aGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGc                                                                                                                                                                                                                                >  1:514702/1‑235 (MQ=255)
                     tGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCgg                                                                                                                                                                                                             <  1:543946/250‑1 (MQ=255)
                         ttCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTc                                                                                                                                                                                                        <  1:187303/251‑1 (MQ=255)
                                       gTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGc                                                                                                                                                                                                               >  1:828840/1‑230 (MQ=255)
                                       gTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGAt                                                                                                                                                                                          >  1:37871/1‑251 (MQ=255)
                                           cAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGAt                                                                                                                                                                                          >  1:231133/1‑247 (MQ=255)
                                                  gAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGc                                                                                                                                                                                                                                >  1:286413/1‑202 (MQ=255)
                                                  gAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATa                                                                                                                                                                               >  1:167495/1‑251 (MQ=255)
                                                  gAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATa                                                                                                                                                                               >  1:893862/1‑251 (MQ=255)
                                                  gAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATa                                                                                                                                                                               >  1:686532/1‑251 (MQ=255)
                                                                       aaGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTc                                                                                                                                                                                                        >  1:413994/1‑205 (MQ=255)
                                                                       aaGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCgtt                                                                                                                                                          >  1:561567/1‑251 (MQ=255)
                                                                        aGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCgttg                                                                                                                                                         >  1:53761/1‑251 (MQ=255)
                                                                                    gATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATg                                                                                                                                             >  1:202992/1‑251 (MQ=255)
                                                                                       tAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAAt                                                                                                                                          <  1:490475/251‑1 (MQ=255)
                                                                                            gATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATg                                                                                                                                      >  1:772198/1‑250 (MQ=255)
                                                                                             aTAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTg                                                                                                                                                                                                                        >  1:461631/1‑167 (MQ=255)
                                                                                             aTAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGc                                                                                                                                     <  1:406148/250‑1 (MQ=255)
                                                                                                 cGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTa                                                                                                                                        <  1:422518/243‑1 (MQ=255)
                                                                                                 cGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGat                                                                                                                                >  1:39529/1‑251 (MQ=255)
                                                                                                   cccTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAAt                                                                                                                                          <  1:106534/239‑1 (MQ=255)
                                                                                                   cccTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGataa                                                                                                                              >  1:857754/1‑251 (MQ=255)
                                                                                                      tAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAatat                                                                                                                           <  1:565024/251‑1 (MQ=255)
                                                                                                      tAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAatat                                                                                                                           <  1:508514/251‑1 (MQ=255)
                                                                                                        atatCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         <  1:50083/251‑1 (MQ=255)
                                                                                                            cTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         <  1:422054/247‑1 (MQ=255)
                                                                                                            cTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATg                                                                                                                     <  1:534033/251‑1 (MQ=255)
                                                                                                                 tAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAAtt                                                                                                                >  1:72406/1‑251 (MQ=255)
                                                                                                                        gCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAAt                                                                                                                                          <  1:848514/218‑1 (MQ=255)
                                                                                                                            tGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTc                                                                                                      <  1:174822/250‑1 (MQ=255)
                                                                                                                                    gTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         <  1:640360/223‑1 (MQ=255)
                                                                                                                                           cccTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCATAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaat                                                                                      >  1:444956‑M1/1‑237 (MQ=255)
                                                                                                                                              tctatctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaa                                                                                   <  1:646505‑M1/251‑18 (MQ=255)
                                                                                                                                               ctatctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                  <  1:629132‑M1/251‑19 (MQ=255)
                                                                                                                                                 atctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGAt                                                                                                                                                                                          >  1:409992/1‑145 (MQ=255)
                                                                                                                                                 atctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTa                                                                                                                                        <  1:53919/195‑1 (MQ=255)
                                                                                                                                                 atctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGc                                                                                                                                     <  1:168737/198‑1 (MQ=255)
                                                                                                                                                 atctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         >  1:221205/1‑210 (MQ=255)
                                                                                                                                                       aTCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtaca                                                                          >  1:341208‑M1/1‑225 (MQ=255)
                                                                                                                                                        tCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTAcc                                                                                                                                                 >  1:547024/1‑179 (MQ=255)
                                                                                                                                                        tCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaata                                                                                     <  1:510887‑M1/239‑16 (MQ=255)
                                                                                                                                                         cATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCgt                                                                                                                                                           >  1:864382/1‑168 (MQ=255)
                                                                                                                                                         cATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAAt                                                                                                                                          >  1:781280/1‑185 (MQ=255)
                                                                                                                                                         cATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         >  1:395594/1‑202 (MQ=255)
                                                                                                                                                           tatatCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattc                                                                       >  1:611268‑M1/1‑221 (MQ=255)
                                                                                                                                                           tatatCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                  <  1:697876‑M1/239‑19 (MQ=255)
                                                                                                                                                             tatCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCgt                                                                                                                                                           >  1:485720/1‑164 (MQ=255)
                                                                                                                                                              atCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacat                                                                         <  1:9578‑M1/245‑28 (MQ=255)
                                                                                                                                                                    aGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCgt                                                                                                                                                           >  1:172745/1‑157 (MQ=255)
                                                                                                                                                                     gTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                  >  1:339304‑M1/1‑211 (MQ=255)
                                                                                                                                                                         ccACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTa                                                                                                                                        <  1:816379/171‑1 (MQ=255)
                                                                                                                                                                         ccACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         >  1:246444/1‑186 (MQ=255)
                                                                                                                                                                           actgatcccAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctga                                                      >  1:267585‑M1/5‑205 (MQ=255)
                                                                                                                                                                           aCTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctga                                                      >  1:73096‑M1/1‑205 (MQ=255)
                                                                                                                                                                              tATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaat                                                   <  1:366088‑M1/251‑50 (MQ=255)
                                                                                                                                                                               aTCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATc                                                                                                                          <  1:204914/179‑1 (MQ=255)
                                                                                                                                                                                     aTAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccc                                                           >  1:697901‑M1/1‑195 (MQ=255)
                                                                                                                                                                                             cAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaata                                                                                     <  1:26933‑M1/202‑16 (MQ=255)
                                                                                                                                                                                                 aaaTGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTAcc                                                                                                                                                 >  1:59361/1‑138 (MQ=255)
                                                                                                                                                                                                   aTGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgtacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaa                              >  1:250189‑M1/1‑181 (MQ=255)
                                                                                                                                                                                                     gTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatc                                                  >  1:599331‑M1/1‑179 (MQ=255)
                                                                                                                                                                                                            gCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcga                     >  1:380631‑M1/1‑172 (MQ=255)
                                                                                                                                                                                                            gCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaat                                                   >  1:341739‑M1/1‑172 (MQ=255)
                                                                                                                                                                                                               ctGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGt                                                                                                                    <  1:191534/153‑1 (MQ=255)
                                                                                                                                                                                                                 gTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCt                                                                                                                         <  1:882857/146‑1 (MQ=255)
                                                                                                                                                                                                                 gTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtac                                                                           <  1:275427‑M1/192‑26 (MQ=255)
                                                                                                                                                                                                                 gTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                  <  1:228946‑M1/185‑19 (MQ=255)
                                                                                                                                                                                                                     cacaATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt            <  1:494114‑M1/251‑89 (MQ=255)
                                                                                                                                                                                                                        aaTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattaga         >  1:652063‑M1/1‑160 (MQ=255)
                                                                                                                                                                                                                         aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagag        >  1:399383‑M1/1‑159 (MQ=255)
                                                                                                                                                                                                                         aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagag        >  1:23627‑M1/1‑159 (MQ=255)
                                                                                                                                                                                                                         aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt            <  1:254352‑M1/247‑89 (MQ=255)
                                                                                                                                                                                                                         aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaat                                                   <  1:68134‑M1/208‑50 (MQ=255)
                                                                                                                                                                                                                         aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccc                                                           >  1:700745‑M1/1‑159 (MQ=255)
                                                                                                                                                                                                                         aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaata                                                                                     >  1:857901‑M1/1‑159 (MQ=255)
                                                                                                                                                                                                                                gcggcACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcatttt  <  1:417583‑M1/250‑99 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                     
TCGCTTGACCTTTAATAAGGGTGCTTTCGCCATTAATCGGTCTCAATACGGAATAAAGCGAATGGTTGACTAAGTTTACCTGTTGATTAAACGATAACGCCCTAATATCTTCATAAATCTGCGGTGCAATCGGTTCAAACCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAACTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTGTTGTAATCGCTTCAATGGCGCACGCGGTTAATAAACGATGTACATTCCCTAAATTACCCCCTGAAATCGTATGAATTTTTGTCGCTAACTCTGGCGA  >  1/312875‑313348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑