| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,985,960 | A→G | S37P (TCT→CCT) | unknown ← | PTS system, sucrose‑specific IIB component (EC 2.7.1.211) / PTS system, sucrose‑specific IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,985,960 | 0 | A | G | 100.0% | 232.1 / NA | 77 | S37P (TCT→CCT) | unknown | PTS system, sucrose‑specific IIB component (EC 2.7.1.211) / PTS system, sucrose‑specific IIC component |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/39); total (38/39) | |||||||||||
TTCAGTG‑TTTTTTATTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGAAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACTTTATTCATCGTGCCGCAACCGAAAATAATCTGATATTGTCCTGCTACGGCAAACTGCACTTTTACACCCTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTTGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAATATTTTCTTTGTCGCCAAGTTTTTCAATAA > 1/1985724‑1986192 | ttCAGTGTTTTTTTATTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAagc < 1:517588/251‑1 (MQ=255)ttCAGTGTTTTTTTATTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAagc < 1:688154/251‑1 (MQ=255) ttttATTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCgg < 1:401767/251‑1 (MQ=255) ttATTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGc < 1:536437/251‑1 (MQ=255) aTTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCa > 1:633224/1‑251 (MQ=255) ccTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCAttt > 1:663920/1‑251 (MQ=255) cTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTa > 1:499628/1‑251 (MQ=255) tAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGc > 1:178604/1‑244 (MQ=255) aaTGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTc < 1:104118/250‑1 (MQ=255) aTGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCgg > 1:289777/1‑251 (MQ=255) gTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCg > 1:43211/1‑251 (MQ=255) aaaTACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGa > 1:885271/1‑250 (MQ=255) aCAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCGCATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTc < 1:898126/251‑1 (MQ=255) aCAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTc < 1:761548/251‑1 (MQ=255) ggATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCg > 1:146328/1‑251 (MQ=255) aTTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCaa > 1:840762/1‑250 (MQ=255) aaTCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGaaa > 1:40342/1‑251 (MQ=255) tCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAagc < 1:792573/189‑1 (MQ=255) aTGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAgcagca < 1:847641/190‑1 (MQ=255) aTGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCg < 1:803127/195‑1 (MQ=255) aTGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGc > 1:708125/1‑198 (MQ=255) aTGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAAc < 1:336548/241‑1 (MQ=255) gTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATc > 1:871654/1‑250 (MQ=255) tAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAaataat > 1:579300/1‑248 (MQ=255) tAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAaat < 1:382344/245‑1 (MQ=255) aCGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGatac < 1:94502/251‑2 (MQ=255) gCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATAc < 1:627928/184‑1 (MQ=255) gCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATc < 1:72404/198‑1 (MQ=255) gCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGatac > 1:375802/1‑248 (MQ=255) gCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGata > 1:263292/1‑248 (MQ=255) tATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGGCCGTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTcc < 1:242860/251‑1 (MQ=255) tttCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGAc < 1:97410/207‑1 (MQ=255) tctaagtaatggcgAAAAAAAATTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTa < 1:307425/238‑1 (MQ=255) aaaGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTc > 1:90303/1‑230 (MQ=255) gAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAagc > 1:585405/1‑151 (MQ=255) aaTTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTa > 1:637919/1‑250 (MQ=255) cacCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATAcc < 1:487958/152‑1 (MQ=255) cacCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGAcc > 1:314919/1‑179 (MQ=255) aaGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAGGTGCCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAAtg < 1:346536/251‑1 (MQ=255) aaGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAAtg < 1:182422/251‑1 (MQ=255) aaGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAAtg > 1:796887/1‑251 (MQ=255) aaGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAAtg < 1:656002/251‑1 (MQ=255) aGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTc < 1:882353/165‑1 (MQ=255) gtcgtcTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCa < 1:802281/250‑1 (MQ=255) cgtcTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATaaagaaa > 1:699131/1‑129 (MQ=255) gtcTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTc < 1:135962/172‑1 (MQ=255) aaCGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAAc < 1:778064/251‑1 (MQ=255) aCGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGatac < 1:135228/192‑2 (MQ=255) gTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACttt > 1:451681/1‑251 (MQ=255) aTCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTac > 1:444507/1‑209 (MQ=255) aGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGaa > 1:297441/1‑250 (MQ=255) tgccAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGaacaa < 1:320466/249‑1 (MQ=255) ccTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACgcgc > 1:239768/1‑250 (MQ=255) cAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCAt < 1:130361/250‑1 (MQ=255) gATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATgg > 1:132615/1‑250 (MQ=255) aTTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGgc < 1:399774/250‑1 (MQ=255) cTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTggg > 1:629246/1‑251 (MQ=255) cTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTggg > 1:740367/1‑251 (MQ=255) cTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGCGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTggg > 1:441028/1‑251 (MQ=255) ttAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTa > 1:802919/1‑251 (MQ=255) tAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGt < 1:676829/249‑1 (MQ=255) gAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGc < 1:882491/78‑1 (MQ=255) gAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCtt > 1:651220/1‑203 (MQ=255) gAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGaac > 1:215402/1‑217 (MQ=255) aaTCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTa < 1:43997/143‑1 (MQ=255) tCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAatat < 1:50502/251‑1 (MQ=255) cATTTGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTc > 1:345458/1‑83 (MQ=255) tttGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACttt < 1:32886/172‑1 (MQ=255) tttGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGgcgc < 1:834626/210‑1 (MQ=255) tttGAAGGGAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAATATTTCCTTTGTCGCCAAGtttt > 1:702419/1‑251 (MQ=255) gggAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTg > 1:191264/1‑216 (MQ=255) ggAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAATATTTCCTTTGTCGCCAAGTTTTTCAATaa > 1:677390/1‑251 (MQ=255) gAGTGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGatac < 1:116176/103‑2 (MQ=255) tGGAAAGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGgc < 1:95511/197‑1 (MQ=255) ggAAAGACAGAAGGAAATAAAGAAAGCAGCATACCGGGCTATTTAATCAATTCGGCGTGGACCTTATTCATCGTTACGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACCCCTTCAAtg < 1:768614/138‑1 (MQ=255) aGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAATAtttcct > 1:26748/1‑217 (MQ=255) aGACTGAAGGAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACCTTATTCATCGTTCCGCAACCGAAAATAATCTGATACTGTCCTGCTACGGCAAACTGCACTTTTACACCTTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTCGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAATAtttc > 1:627086/1‑217 (MQ=255) | TTCAGTG‑TTTTTTATTCCTAATAGGGAATGTCCAAAATACGACAAGGATTTTTTATTGTAATCCATGTAATACGCTTATTTCTGAGTAAGTGCGGAAAAGAATTTACACCAAGTGCGGTCGTCTTACAAAACGTTTTTCATTATCAGAAAAGTACCAACCTGTTTGCAGATTCGCGCTTTAATGGAACAAATCTAAATCACATTTTTAGCATTTGAAGGGAGTGGAAAGACTGAAGAAAATAAAGAAAGCAGCATACCGGGCCATTTAATCAATTCGGCGTGGACTTTATTCATCGTGCCGCAACCGAAAATAATCTGATATTGTCCTGCTACGGCAAACTGCACTTTTACACCCTCAATGTTGTCAATGCCTTGTCAACTTTGCTTTTGTTATTCAGAACAACGCGCCAACGCATGGCGCAGTGGGTAGCTGTCACAATATTTTCTTTGTCGCCAAGTTTTTCAATAA > 1/1985724‑1986192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |