Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,983,081	G→A	P119S (CCT→TCT)	unknown ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,983,081	0	G	A	100.0%	165.0 / NA	58	P119S (CCT→TCT)	unknown	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (31/27);  total (31/27)

CTTTATTATTTTGCATAATAAACCTATTTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGGTTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCGAGAATGCCAACGATTTGTGCTAATC  >  1/1982839‑1983308                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                    aagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGc                                                                                                                                                                                                                             <  1:18919‑M2/223‑1 (MQ=255)                   taataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATATACTTTTTTTAGATTTAGGGCGATGTCTACAATATtgtg                                                                                                                                                                                                           >  1:828723‑M2/11‑251 (MQ=255)                        aacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATc                                                                                                                                                                                                      <  1:865012‑M2/246‑1 (MQ=255)                                      tGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaag                                                                                                                                                                                        <  1:870850/251‑1 (MQ=255)                                      tGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaag                                                                                                                                                                                        >  1:208663/1‑251 (MQ=255)                                       gAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAat                                                                                                                                                                                                                 <  1:894114/225‑1 (MQ=255)                                        aGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATGGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaaga                                                                                                                                                                                       <  1:187616/250‑1 (MQ=255)                                            aTTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAAGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAatat                                                                                                                                                                                                               >  1:447973/1‑222 (MQ=255)                                                                    tCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGAt                                                                                                                                                          <  1:749693/251‑1 (MQ=255)                                                                               ttattTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCAc                                                                                                                                               <  1:409897/251‑1 (MQ=255)                                                                                     cTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCt                                                                                                                                                                                                     <  1:648378/191‑1 (MQ=255)                                                                                             tttttAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTaaa                                                                                                                                 >  1:22357/1‑251 (MQ=255)                                                                                                              aaaaCCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAg                                                                                                                 <  1:346880/250‑1 (MQ=255)                                                                                                                           gATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGc                                                                                                                                                                                                                             >  1:203947/1‑129 (MQ=255)                                                                                                                           gATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCAc                                                                                                                                               >  1:131883/1‑207 (MQ=255)                                                                                                                              cTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAgg                                                                                                                                                                                    <  1:293127/167‑1 (MQ=255)                                                                                                                              cTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCAc                                                                                                                                               <  1:176505/204‑1 (MQ=255)                                                                                                                                   tAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaagaa                                                                                                                                                                                      >  1:879328/1‑160 (MQ=255)                                                                                                                                     gCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAatat                                                                                                                                                                                                               >  1:291516/1‑133 (MQ=255)                                                                                                                                     gCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAat                                                                                                                                                                                                                 >  1:127520/1‑131 (MQ=255)                                                                                                                                     gCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCt                                                                                                                                                                                                     >  1:552692/1‑143 (MQ=255)                                                                                                                                     gCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaaga                                                                                                                                                                                       <  1:777175/157‑1 (MQ=255)                                                                                                                                     gCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAAc                                                                                                                                                       <  1:419048/189‑1 (MQ=255)                                                                                                                                     gCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTa                                                                                         >  1:448776/1‑251 (MQ=255)                                                                                                                                      cTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAatat                                                                                                                                                                                                               <  1:285707/132‑1 (MQ=255)                                                                                                                                      cTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAgg                                                                                                                                                                                    <  1:738518/159‑1 (MQ=255)                                                                                                                                      cTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTa                                                                                         >  1:247691/1‑250 (MQ=255)                                                                                                                                      cTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTa                                                                                         >  1:867993/1‑250 (MQ=255)                                                                                                                                        atataGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGc                                                                                                                                                                                                                             <  1:384020/116‑1 (MQ=255)                                                                                                                                        atataGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGt                                                                                                                                                                                   >  1:451779/1‑158 (MQ=255)                                                                                                                                        atataGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCAc                                                                                                                                               >  1:143981/1‑194 (MQ=255)                                                                                                                                        atataGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCt                                                                                          <  1:820031/247‑1 (MQ=255)                                                                                                                                               agcTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTaa                                                                                                                                                                                                        <  1:17730/130‑1 (MQ=255)                                                                                                                                                gcTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCAc                                                                                                                                               <  1:119194/186‑1 (MQ=255)                                                                                                                                                   aGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAgg                                                                                                                                                                                    <  1:193341/146‑1 (MQ=255)                                                                                                                                                     ccccATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCAt                                                                         >  1:214861/1‑251 (MQ=255)                                                                                                                                                                  gTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAatat                                                                                                                                                                                                               >  1:268238/1‑104 (MQ=255)                                                                                                                                                                  gTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAat                                                                                                                                                                                                                 >  1:437964/1‑102 (MQ=255)                                                                                                                                                                  gTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAg                                                                                            >  1:477118/1‑219 (MQ=255)                                                                                                                                                                               tttAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAatat                                                                                                                                                                                                               <  1:28106/91‑1 (MQ=255)                                                                                                                                                                                       cAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAAc                                                                                                                                                       >  1:737528/1‑139 (MQ=255)                                                                                                                                                                                        aGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGc                                                                                                                               <  1:391205/162‑1 (MQ=255)                                                                                                                                                                                          ttAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAg                                      <  1:671052/249‑1 (MQ=255)                                                                                                                                                                                               cGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAatat                                                                                                                                                                                                               <  1:30419/75‑1 (MQ=255)                                                                                                                                                                                                    gCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCga                          >  1:490781/1‑251 (MQ=255)                                                                                                                                                                                                    gCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCga                          >  1:309618/1‑251 (MQ=255)                                                                                                                                                                                                       taataaGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCGAGaa                       >  1:708086/1‑251 (MQ=255)                                                                                                                                                                                                           aaGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTgtgt                                                                                                                                                                                                          >  1:331082/1‑68 (MQ=255)                                                                                                                                                                                                            aGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaagaa                                                                                                                                                                                      >  1:384911/1‑87 (MQ=255)                                                                                                                                                                                                              cAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTa                                                 >  1:790835/1‑218 (MQ=255)                                                                                                                                                                                                                     ggTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCGAGAATGCCAACGATTtgt         >  1:239332/1‑251 (MQ=255)                                                                                                                                                                                                                      gTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAg                                                                                                                 >  1:663648/1‑146 (MQ=255)                                                                                                                                                                                                                      gTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCt                                                                                 <  1:95567/178‑1 (MQ=255)                                                                                                                                                                                                                      gTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTa                                                 >  1:762721/1‑210 (MQ=255)                                                                                                                                                                                                                      gTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTAt                                                >  1:897253/1‑211 (MQ=255)                                                                                                                                                                                                                             gggAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCGAGAATGCCAACGATTTGTGCTAATc  <  1:24953/250‑1 (MQ=255)                                                                                                                                                                                                                             gggAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCGAGAATGCCAACGATTTGTGCTAATc  <  1:189335/250‑1 (MQ=255)                                                                                                                                                                                                                                 aGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATaagaa                                                                                                                                                                                      >  1:174825/1‑66 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                    CTTTATTATTTTGCATAATAAACCTATTTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGGTTTAGGGCGATGTCTACAATATTGTGTAATCTGTGACAGTATAAGAAGGTTGGTAAAATTAGATTTAAAGTGGATAACTATGGCACTTGCGACAAGTAAAGCACTATTTCTTAAAGTGAGGGAAACTTCTTGTTTAGCTACCTCACCTTCCAGCATGCCATCATTAAAAGTACTTTGGTATTTCCAAATAGTTTTTTCGCCGAGAATGCCAACGATTTGTGCTAATC  >  1/1982839‑1983308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑