| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,976,177 | T→C | E192E (GAA→GAG) | unknown ← | RTX toxin transporter, determinant D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,976,177 | 0 | T | C | 100.0% | 164.6 / NA | 54 | E192E (GAA→GAG) | unknown | RTX toxin transporter, determinant D |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (26/28); total (26/28) | |||||||||||
CCTTATATACCTCAAGCTCATTGATTGCATCCTGATATTTATTCTCTTCATCTAAAACTGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGCTCTGTATTAATCAGACCTTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCCGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGTTCTTCAATCAGTAAAGTCACTCTTTTTTGATCGTTTTCCGTCATAAAAGGTAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCCAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACA > 1/1975939‑1976420 | ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGt > 1:199800/1‑251 (MQ=255)ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGt > 1:352678/1‑251 (MQ=255) ttATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTaa > 1:75601/1‑251 (MQ=255) cttCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCAc > 1:262639/3‑250 (MQ=255) aGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCtttt > 1:6896/1‑251 (MQ=255) tCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATc < 1:408999/219‑1 (MQ=255) atatTTAATTTCTTCAACTAAAACCCTAAGTTTTTCAAAAGCATTGTT‑CTTAAATAAAGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATaa < 1:547933/251‑1 (MQ=255) aTCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAAttt > 1:833953/1‑251 (MQ=255) aTCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAAttt > 1:711612/1‑251 (MQ=255) accgTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGaaaa > 1:889527/4‑251 (MQ=255) tttGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:742546/251‑1 (MQ=255) cAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGt > 1:236792/1‑251 (MQ=255) tCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAg < 1:423943/175‑1 (MQ=255) tCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:537445/236‑1 (MQ=255) ccTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAggc < 1:10206/209‑2 (MQ=255) atataAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:416354/231‑1 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATc > 1:694981/1‑156 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAggc < 1:547350/198‑2 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAgg < 1:364500/197‑1 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:567329/224‑1 (MQ=255) gACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAAt > 1:101900/1‑211 (MQ=255) gttctGTATTAATCAAGCCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATc < 1:11146/176‑1 (MQ=255) gttctGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTaa > 1:664663/3‑136 (MQ=255) gttctGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAAc < 1:215/218‑1 (MQ=255) gttctGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATtc > 1:772671/3‑250 (MQ=255) gttctGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTCCAATCAGTAAAGTCACCCTTTTTTGAt > 1:342548/3‑153 (MQ=255) gTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCCCCCTTTTTTGAt < 1:818959/148‑1 (MQ=255) gTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATaa < 1:282918/237‑1 (MQ=255) gTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATaa < 1:688735/237‑1 (MQ=255) gTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATtcctctag > 1:635242/1‑248 (MQ=255) gTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATtcctctag > 1:186638/1‑248 (MQ=255) gTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATtcctctag > 1:529957/1‑248 (MQ=255) ttAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGttt < 1:336917/251‑1 (MQ=255) tcaaaccctCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCt < 1:887829/243‑1 (MQ=255) tcaaaccctCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCt < 1:845734/243‑1 (MQ=255) tcaaaccctCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCt < 1:515300/243‑1 (MQ=255) ccctCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTgaga > 1:7073/4‑251 (MQ=255) cctCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGaa < 1:151377/249‑1 (MQ=255) tttATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCtt < 1:641919/251‑1 (MQ=255) cAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACg < 1:269433/251‑1 (MQ=255) tAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGaa < 1:144201/144‑1 (MQ=255) tAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTAt > 1:638896/1‑250 (MQ=255) ttttCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGc < 1:385931/251‑1 (MQ=255) ttctgCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAATTTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCAc < 1:849074/247‑1 (MQ=255) ttctgCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCAc < 1:52828/247‑1 (MQ=255) gATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGa > 1:439747/1‑160 (MQ=255) aTGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCtttt > 1:618115/1‑251 (MQ=255) cGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCAc < 1:767103/251‑1 (MQ=255) gttTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAAt > 1:106226/1‑230 (MQ=255) aaGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCct > 1:277232/1‑249 (MQ=255) gTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCttt > 1:412925/1‑251 (MQ=255) agagAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGCTTTAACa > 1:139749/1‑215 (MQ=255) agaATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTcaca > 1:704080/1‑251 (MQ=255) gaATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACa < 1:301927/212‑1 (MQ=255) | CCTTATATACCTCAAGCTCATTGATTGCATCCTGATATTTATTCTCTTCATCTAAAACTGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGCTCTGTATTAATCAGACCTTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCCGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGTTCTTCAATCAGTAAAGTCACTCTTTTTTGATCGTTTTCCGTCATAAAAGGTAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCCAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACA > 1/1975939‑1976420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |