| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,975,949 | C→T | E268E (GAG→GAA) | unknown ← | RTX toxin transporter, determinant D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,975,949 | 0 | C | T | 100.0% | 249.6 / NA | 87 | E268E (GAG→GAA) | unknown | RTX toxin transporter, determinant D |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (36/51); total (36/51) | |||||||||||
ACGCCATCTATTGTGTGAACTTTTAATTGTTGTACAGTACCTGATACAGGAGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGTTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCGTTTTCAACTTGCATTAAACTCGCCTTATATACCTCAAGCTCATTGATTGCATCCTGATATTTATTCTCTTCATCTAAAACTGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGCTCTGTATTAATCAGACCTTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCCGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGTTCTTCAATCAGTAA > 1/1975710‑1976191 | acGCCATCTATTGTGTGAACCTTTAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGc > 1:251568/1‑246 (MQ=255) cATCTATTGTGTGAACCTTTAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCattgatt > 1:659155/1‑251 (MQ=255) tCTATTGTGTGAACCTTTAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCt > 1:648322/1‑241 (MQ=255) tCTATTGTGTGAACCTTTAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGc < 1:387771/251‑1 (MQ=255) aTTGTGTGAACCTTTAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCAt > 1:784155/1‑250 (MQ=255) acctttAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtattt < 1:325501/248‑1 (MQ=255) cctttAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATcc < 1:139662/240‑1 (MQ=255) cctttAATTGCTGTACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtattta > 1:400440/3‑251 (MQ=255) ttgctgtACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtattt < 1:16362/239‑1 (MQ=255) gctgtACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCa > 1:777437/3‑251 (MQ=255) gtACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTGGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtatttattttc < 1:317743/244‑4 (MQ=255) gtACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCattgat < 1:818521/223‑1 (MQ=255) gtACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtatttattttc < 1:22999/244‑4 (MQ=255) gtACAGTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtatttattt > 1:751284/1‑241 (MQ=255) gTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTaaaa > 1:871507/1‑250 (MQ=255) gTACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTaaaa > 1:136234/1‑250 (MQ=255) tACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc < 1:767253/250‑1 (MQ=255) tACCCGATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc < 1:132765/250‑1 (MQ=255) acccgATACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc < 1:627754/245‑1 (MQ=255) aTACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATcc > 1:120990/1‑218 (MQ=255) aTACAGGGGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGt < 1:752268/251‑1 (MQ=255) tCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAg < 1:693931/251‑1 (MQ=255) cTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAACCCGTATGTTTTGCAATAGCATGTTCCTtatat < 1:70760/251‑1 (MQ=255) cTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTtatat < 1:193628/251‑1 (MQ=255) cTTGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTtatat < 1:660437/251‑1 (MQ=255) ttGCTGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTtatata < 1:471038/251‑1 (MQ=255) tGGCGTTGATTGTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGc < 1:408149/251‑1 (MQ=255) gTTTTTGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGt > 1:120830/1‑211 (MQ=255) tttttGTCCAGCTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAatcat > 1:178317/1‑250 (MQ=255) cagctCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc > 1:194617/5‑195 (MQ=255) cagctCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAatcatc > 1:649926/5‑243 (MQ=255) gctCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGa > 1:598578/3‑249 (MQ=255) ctCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACt < 1:58967/249‑1 (MQ=255) ctCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACt < 1:114981/249‑1 (MQ=255) aaTGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTgttc < 1:781088/251‑4 (MQ=255) aaTGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAAGCGGACTTgttc < 1:576111/251‑4 (MQ=255) cAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGt > 1:336852/1‑190 (MQ=255) cAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt < 1:39352/251‑1 (MQ=255) cAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt < 1:318696/251‑1 (MQ=255) aaTTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGAc < 1:105459/235‑1 (MQ=255) aaTTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:193769/251‑1 (MQ=255) aaTTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:513042/251‑1 (MQ=255) aTCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCat > 1:799740/1‑251 (MQ=255) cGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGc < 1:51090/180‑1 (MQ=255) gTTTTAGCTTGTTTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTcc < 1:438768/182‑1 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGGTATTTATTTTCTTCATCTAAAAc < 1:770819/157‑1 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc < 1:656104/157‑1 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc > 1:504482/1‑157 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTtatat < 1:733758/188‑1 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGc < 1:181560/193‑1 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt > 1:601263/1‑225 (MQ=255) gTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGAtatttat > 1:329671/1‑131 (MQ=255) gTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc < 1:48847/147‑1 (MQ=255) tAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAAc < 1:198472/251‑1 (MQ=255) tAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAAc < 1:408547/251‑1 (MQ=255) atatCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCa < 1:860236/159‑1 (MQ=255) atatCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAg < 1:782420/251‑1 (MQ=255) tttttGAACAATTGTGTGACTAATTCCTGCTCTTCCTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGc > 1:638874/1‑170 (MQ=255) aCAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGctt > 1:670150/1‑249 (MQ=255) aTTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGc < 1:155644/160‑1 (MQ=255) ttGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt < 1:219466/191‑1 (MQ=255) gtgtgACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTtatata < 1:364217/153‑1 (MQ=255) gtgtgACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAg < 1:746525/155‑1 (MQ=255) gACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt > 1:116335/1‑185 (MQ=255) gACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTaa > 1:435061/1‑251 (MQ=255) aCTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGc < 1:590578/152‑1 (MQ=255) cTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAgg < 1:183096/251‑1 (MQ=255) tcttTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTctgc > 1:733433/1‑218 (MQ=255) ggCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATgg > 1:406150/1‑250 (MQ=255) aaaaCTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCAGCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGttt < 1:439934/251‑1 (MQ=255) cattttCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCaa > 1:647008/3‑251 (MQ=255) attttCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAAt > 1:293342/2‑96 (MQ=255) cTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATGTTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:121285/251‑1 (MQ=255) cTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:747743/251‑1 (MQ=255) cTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:460123/251‑1 (MQ=255) gCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAAt > 1:235635/1‑85 (MQ=255) gCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTg > 1:839066/1‑250 (MQ=255) gCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTc < 1:743587/154‑1 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAAc < 1:851052/58‑1 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTTTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATAttttt > 1:126148/1‑147 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:425224/131‑1 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc > 1:870081/1‑131 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGt > 1:352678/1‑251 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGt > 1:199800/1‑251 (MQ=255) cTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGt < 1:109787/64‑1 (MQ=255) ttATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTaa > 1:75601/1‑251 (MQ=255) atataCTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAAc > 1:33051/1‑161 (MQ=255) | ACGCCATCTATTGTGTGAACTTTTAATTGTTGTACAGTACCTGATACAGGAGCTCGAATTTCAGAGACTTGCTGGCGTTGATTGTTTTTGTCCAGTTCGAATGTCAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCGTTTTCAACTTGCATTAAACTCGCCTTATATACCTCAAGCTCATTGATTGCATCCTGATATTTATTCTCTTCATCTAAAACTGTATGTTTTGCAATAGCATGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGCTCTGTATTAATCAGACCTTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCCGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGTTCTTCAATCAGTAA > 1/1975710‑1976191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |