| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,935,391 | T→C | V269A (GTA→GCA) | unknown → | Phosphoserine aminotransferase (EC 2.6.1.52) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,935,391 | 0 | T | C | 98.5% | 191.0 / ‑2.7 | 66 | coding (806/1083 nt) | unknown | Phosphoserine aminotransferase (EC 2.6.1.52) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (42/23); minor base . (1/0); total (43/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
ATTTATGCCGGTGCACAAAAAAACCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGTAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAACGCCATGCCGATTGAAGGCGTACAAGCATTGATTGC > 1/1935153‑1935634 | aTTTATGCCGGTGCACAAAAAAACCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGaaa > 1:161656/1‑249 (MQ=255) gTGCACAAAAAAACCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGat > 1:799891/1‑251 (MQ=255) gTGCACAAAAAAACCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGa < 1:681812/250‑1 (MQ=255) gTGCACAAAAAAACCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGa < 1:627435/250‑1 (MQ=255) aaaaCCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGAc < 1:697893/251‑1 (MQ=255) aTCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAAtgt > 1:334460/1‑251 (MQ=255) tCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAAtgtg > 1:536954/1‑251 (MQ=255) tCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCAGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCGATAAtgtg > 1:447267/1‑251 (MQ=255) tGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGG‑CAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGa > 1:286679/1‑251 (MQ=255) gATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGat > 1:701342/1‑211 (MQ=255) cGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGa < 1:507345/207‑1 (MQ=255) gTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAg > 1:153785/1‑250 (MQ=255) tCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCGAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTaatg > 1:436348/1‑251 (MQ=255) gTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCttt > 1:725245/1‑251 (MQ=255) aaGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCt > 1:498110/1‑198 (MQ=255) aaGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTAc > 1:742809/1‑200 (MQ=255) aaGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCt > 1:823645/1‑246 (MQ=255) aaGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTac > 1:97742/1‑250 (MQ=255) aaGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTac > 1:213213/1‑250 (MQ=255) acacCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTAttt > 1:881/1‑176 (MQ=255) cacCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTaccacccg > 1:515237/1‑248 (MQ=255) gTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCgatg > 1:195965/1‑251 (MQ=255) gAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTaccac > 1:292132/1‑234 (MQ=255) gAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGAtgaactg < 1:185333/250‑1 (MQ=255) tCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTaccac > 1:850125/1‑206 (MQ=255) tCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCAccg > 1:108638/1‑250 (MQ=255) aTCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTAttt < 1:849570/128‑1 (MQ=255) aTCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAgg > 1:138204/1‑251 (MQ=255) aTCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAgg > 1:706341/1‑251 (MQ=255) tCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGt > 1:512446/1‑251 (MQ=255) acacCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTTTTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTa > 1:500136/1‑251 (MQ=255) cccccGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACa < 1:135764/250‑1 (MQ=255) cccGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAgg < 1:58917/251‑1 (MQ=255) cccGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAgg < 1:391374/251‑1 (MQ=255) gACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTaa > 1:230717/1‑251 (MQ=255) aCTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTaaa < 1:619422/251‑1 (MQ=255) tttCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCGCCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAg < 1:397438/251‑1 (MQ=255) tGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTaccac < 1:60167/176‑1 (MQ=255) tGGTACTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACaa > 1:56943/1‑251 (MQ=255) gTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTgg > 1:688689/1‑134 (MQ=255) gTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTCCCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAg > 1:453879/1‑251 (MQ=255) gTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCggtggtaaag > 1:220067/1‑209 (MQ=255) gTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAg < 1:622327/232‑1 (MQ=255) gTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAg > 1:556337/1‑251 (MQ=255) tATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGACACAAAg < 1:645780/250‑1 (MQ=255) tttATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTg > 1:406017/1‑250 (MQ=255) ttATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTg > 1:102395/1‑249 (MQ=255) gtgCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCtt > 1:693100/1‑248 (MQ=255) gtgCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTgg > 1:588854/1‑250 (MQ=255) gCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAg < 1:37918/222‑1 (MQ=255) ggTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGAtgaactg > 1:413170/1‑175 (MQ=255) aTTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTaat > 1:85266/1‑138 (MQ=255) aTTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATgcgcg > 1:385689/1‑251 (MQ=255) aTTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATgcgcg < 1:837156/251‑1 (MQ=255) aTTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAAACGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAg > 1:868229/1‑224 (MQ=255) tatcggctatcggcGGCTTGCCGGAAATCGAAAAACGCACCCCGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTCCCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTATAAGGGCACAAAGTGATTGGCGGTATGCGCGCGTCCATTtat < 1:496374/251‑1 (MQ=255) tatcggctatcggcGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTtat < 1:884727/251‑1 (MQ=255) tcggctatcggcGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATaa < 1:316587/251‑1 (MQ=255) cggctatcggcGGCTTGCCGGAAATCGAAAATCGCATCGGGGCAGAAGCGAAGCGGCTTTGCGATTATTTGGAAGGCAGCGATTTCTACCGCGATAGTGTGGCGAAAGCCACCCGCAGTTTAATGAATGTATCCTTTTCCACCGGCAATGATGAAGTGAACGCCAAATTCATCGCCGCTGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAAc < 1:686750/251‑1 (MQ=255) cggctatcggcGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAAc < 1:413963/251‑1 (MQ=255) gctatcggcGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAAtgt > 1:892157/1‑98 (MQ=255) gctatcggcGGCTTGCCGGAAATCGAAAAACGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAACg > 1:235154/1‑250 (MQ=255) aaaaaCGCAACCTGGCAAAAGCGAAACTGCTTTACGATGATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCGCCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCGTCGCGGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAACGCCATGCCGATTGAAGGCGTACAAGCa < 1:490543/251‑1 (MQ=255) aaaaCGCAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAACGCCATGCCGATTGAAGGCGTACAAGCat < 1:755448/251‑1 (MQ=255) cAACCTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTacc > 1:540519/1‑106 (MQ=255) ccTGGCAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAACGCCATGCCGATTGAAGGCGTACAAGCATTGATTGc > 1:728689/1‑249 (MQ=255) | ATTTATGCCGGTGCACAAAAAAACCTCGGTCCGGCAGGGATTACCATCGTGATCGTACGTGACGATCTCATCGGTAAGGCACGTAAAGCCACACCGTCCATTTGGAATTACGAAATTCAGAAAAACAGCGATTCCATGATCAACACCCCGCCGACTTTCGCATGGTATTTATGTGCCTTGGTATTCAAACATTTATCGGCTATCGGCGGCTTGCCGGAAATCGAAAAACGCAACCTGGTAAAAGCGAAACTGCTTTACGATTATTTGGACGGCAGCGATTTCTACCGCAATAATGTGGCGAAAGCCAACCGCTCTTTAATGAATGTCACCTTTACCACCGGCGATGATGAACTGAACGCCAAATTCATCGCCGAAGCCACCGCCGCAGGTTTACAGGCGTTAAAAGGGCACAAAGTGCTTGGCGGTATGCGCGCGTCCATTTATAACGCCATGCCGATTGAAGGCGTACAAGCATTGATTGC > 1/1935153‑1935634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |