| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 39,765 | T→G | intergenic (‑293/+284) | unknown ← / ← unknown | Cytochrome c552 precursor (EC 1.7.2.2)/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 39,765 | 0 | T | G | 100.0% | 12.9 / NA | 6 | intergenic (‑293/+284) | unknown/unknown | Cytochrome c552 precursor (EC 1.7.2.2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (3/3); total (3/3) | |||||||||||
ATAAGGTATAAAAGGGGGTTAAACGAGTTTAACATAACCAAATATCCGCGCTCATTCCATGGTTATTTTACATTTTCTTGTTTTTGATCAATTTTTCCAATTTAATTTTCTATTTTAGTGAAATTTTGTAGCATGAAAATTTCTCCTAAAATGTGTCAACTACCTATTTATTAGTATAAAAATATCATTAAATGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACATTTTATGCTACAAAAAAGAATTATTTTTATTTGAATATTTTATCGAAGAAGAAATACCCTAATTACGGGCAATAAAAAACCGAACTCATCGAAATGAATTCGGCTTTCTGATTTGATGTTCTACTCTAAAAGTGCGGTTAATTTCTTACTCATAAATCTTGAAGATTTACTT > 1/39573‑39988 | ataAGGTATAAAAGGGGGTTAAACGAGTTTAACATAACCAAATATCCGCGCTCATTCCATGGTTATTTTACATTTTCTTGTTTTTGATCAATTTTTCCAATTTAATTTTCTATTTTAGTGAAATTTTGTAGCATGAAAATTTCTCCTAAAATGTGTCAACTACCTATTTATTAGTATAAAAATATCATTAAAGGGGAAAATTAAATGAAGCAGAAATATATAAc < 1:273020/224‑1 (MQ=255) ggTTAAACGAGTTTAACATAACCAAATATCCGCGCTCATTCCATGGTTATTTTACATTTTCTTGTTTTTGATCAATTTTTCCAATTTAATTTTCTATTTTAGTGAAATTTTGTAGCATGAAAATTTCTCCTAAAATGTGTCAACTACCTATTTATTAGTATAAAAATATCATTAAAGGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACATTTTATGCTACAAAAAAGAatta > 1:813777/1‑251 (MQ=255) aTGGTTATTTTACATTTTCTTGTTTTTGATCAATTTTTCCAATTTAATTTTCTATTTTAGTGAAATTTTGTAGCATGAAAATTTCTCCTAAAATGTGTCAACTACCTATTTATTAGTATAAAAATATCATTAAAGGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACATTTTATGCTACAAAAAAGAATTATTTTTATTTGAATATTTTATCGAAGAAGAAATACCCTAATTa < 1:217793/251‑1 (MQ=255) atttattAGTATAAAAATATCATTAAAGGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACATTTTATGCTACAAAAAAGAATTATTTTTATTTGAATATTTTATCGAAGAAGAAATACCCTAATTACGGGCAATAAAAAACCGAACTCATCGAAATGAATTCGGCTTTCTGATTTGATGTTCTACTCTAAAAGTGCGGTTAATTTCTTACTCATAAATCTTGAAGATTTACtt > 1:195623/1‑251 (MQ=255) atttattAGTATAAAAATATCATTAAAGGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACATTTTATGCTACAAAAAAGAATTATTTTTATTTGAATATTTTATCGAAGAAGAAATACCCTAATTACGGGCAATAAAAAACCGAACTCATCGAAATGAATTCGGCTTTCTGATTTGATGTTCTACTCTAAAAGTGCGGTTAATTTCTTACTCATAAATCTTGAAGATTTACtt > 1:792396/1‑251 (MQ=255) gTATAAAAATATCATTAAAGGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACAt < 1:485576/72‑1 (MQ=255) | ATAAGGTATAAAAGGGGGTTAAACGAGTTTAACATAACCAAATATCCGCGCTCATTCCATGGTTATTTTACATTTTCTTGTTTTTGATCAATTTTTCCAATTTAATTTTCTATTTTAGTGAAATTTTGTAGCATGAAAATTTCTCCTAAAATGTGTCAACTACCTATTTATTAGTATAAAAATATCATTAAATGGGAAAATTAAATGAAGCAGAAATATATAACTATAAAGAGGTATATTTACATTTTATGCTACAAAAAAGAATTATTTTTATTTGAATATTTTATCGAAGAAGAAATACCCTAATTACGGGCAATAAAAAACCGAACTCATCGAAATGAATTCGGCTTTCTGATTTGATGTTCTACTCTAAAAGTGCGGTTAATTTCTTACTCATAAATCTTGAAGATTTACTT > 1/39573‑39988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |