| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,782,324 | C→T | A152V (GCA→GTA) | unknown → | Manganese ABC transporter, ATP‑binding protein SitB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,782,324 | 0 | C | T | 98.8% | 217.8 / NA | 80 | A152V (GCA→GTA) | unknown | Manganese ABC transporter, ATP‑binding protein SitB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (42/37); minor base A (1/0); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAATTAAACAAGCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGCATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCTGCAGGTTTGACCGAAACTACTTT > 1/1782081‑1782558 | caATTAAACAAGCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCtt > 1:363336/1‑251 (MQ=255)caATTAAACAAGCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCtt > 1:150275/1‑251 (MQ=255)caATTAAACAAGCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCtt > 1:777724/1‑251 (MQ=255) aaaCAAGCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTc > 1:57882/1‑244 (MQ=255) gCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTcgcgcg > 1:110194/1‑249 (MQ=255) ccTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCt > 1:741315/1‑250 (MQ=255) cAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCacaaca < 1:504815/251‑1 (MQ=255) aaaaTTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCAcaacaa < 1:737686/251‑1 (MQ=255) aTTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGt > 1:840742/1‑251 (MQ=255) gtCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGatta > 1:897195/1‑251 (MQ=255) tCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGatta < 1:658963/250‑1 (MQ=255) cTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGattatt > 1:466174/1‑251 (MQ=255) tATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGAttatttt < 1:173587/251‑1 (MQ=255) aTGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGAttatttta > 1:441889/1‑251 (MQ=255) tgCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTg < 1:427544/251‑1 (MQ=255) caATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAg > 1:793594/1‑234 (MQ=255) gACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCa > 1:205698/1‑250 (MQ=255) aCGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCAc > 1:387116/1‑250 (MQ=255) tGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGC‑AAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGAt < 1:628354/251‑1 (MQ=255) gCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGAt < 1:561030/250‑1 (MQ=255) ttCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACaa < 1:874068/251‑1 (MQ=255) ttCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACaa < 1:876927/251‑1 (MQ=255) ctGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGAttatttt > 1:144608/1‑208 (MQ=255) ctGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCAcc < 1:748295/227‑1 (MQ=255) ctGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCAcc > 1:651791/1‑227 (MQ=255) gTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGt < 1:845882/195‑1 (MQ=255) gTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGAt < 1:740368/234‑1 (MQ=255) gTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACg > 1:721780/1‑250 (MQ=255) gTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACg > 1:717386/1‑250 (MQ=255) gTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACg > 1:776891/1‑250 (MQ=255) gtggtgCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGatta < 1:10661/193‑1 (MQ=255) gtggtgCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTg > 1:16859/1‑201 (MQ=255) gtggtgCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGa > 1:449971/1‑251 (MQ=255) gtgCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGt < 1:239567/183‑1 (MQ=255) tgCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATtta < 1:821285/251‑1 (MQ=255) gCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGAATTTCTTGCTCGCGCGCTCACACAACAAAGAAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATttat > 1:443719/1‑251 (MQ=255) gATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAg > 1:169688/1‑251 (MQ=255) gggCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTc < 1:408646/250‑1 (MQ=255) cTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCAc > 1:821460/1‑198 (MQ=255) cTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTa < 1:789565/250‑1 (MQ=255) aTGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGt > 1:764897/1‑167 (MQ=255) aTGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGc < 1:79297/251‑1 (MQ=255) tGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAggg < 1:494953/251‑1 (MQ=255) cTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTaa < 1:187731/156‑1 (MQ=255) cTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGAttatttt < 1:642036/165‑1 (MQ=255) ttCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCAttt > 1:754093/1‑251 (MQ=255) ttCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCAttt > 1:465020/1‑251 (MQ=255) tGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAAtt < 1:441235/251‑1 (MQ=255) gTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGtt > 1:105854/1‑251 (MQ=255) gAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCa > 1:673240/1‑251 (MQ=255) aGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTgg > 1:37181/1‑244 (MQ=255) aaacaaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAgg < 1:638577/251‑1 (MQ=255) aacaaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACaa < 1:298271/170‑1 (MQ=255) aacaaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTc < 1:23655/228‑1 (MQ=255) aacaaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGt > 1:721104/1‑251 (MQ=255) aacaaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGt < 1:133021/251‑1 (MQ=255) acaaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGtt < 1:577774/251‑1 (MQ=255) caaaAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTc < 1:688761/251‑1 (MQ=255) gCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTc < 1:149789/218‑1 (MQ=255) gCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCgg > 1:366051/1‑251 (MQ=255) ccATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGc < 1:129715/191‑1 (MQ=255) ggTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCattat > 1:35632/1‑159 (MQ=255) aCATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAgg > 1:48982/1‑166 (MQ=255) aCATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATg > 1:151984/1‑251 (MQ=255) aCATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATg > 1:12737/1‑251 (MQ=255) ttGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGAtt < 1:761555/251‑1 (MQ=255) ttGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGAtt < 1:21484/251‑1 (MQ=255) acacCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAAcc < 1:280961/251‑1 (MQ=255) ccTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAAttt > 1:766266/1‑204 (MQ=255) ccTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGAtt > 1:390241/1‑244 (MQ=255) gCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCattat < 1:355711/140‑1 (MQ=255) cccATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTa > 1:493631/1‑251 (MQ=255) cGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAg > 1:631199/1‑158 (MQ=255) cGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTa < 1:815474/171‑1 (MQ=255) ccAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCt < 1:363114/250‑1 (MQ=255) aTCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCTGCAgg > 1:529484/1‑251 (MQ=255) cGGCGAGCTTTCCGGTTGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCTGCAGGtt < 1:490027/251‑1 (MQ=255) gCTTTCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTc > 1:856101/1‑161 (MQ=255) ttCCGGTGGGCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGCACAAACGGAAAACGCCATTATTGATTTATTAGGACAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCTGCAGGtt > 1:191465/1‑242 (MQ=255) gggCAAAAAAAACGGGTATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCTGCAGGTTTGACCGAAACTACttt > 1:496271/1‑251 (MQ=255) | CAATTAAACAAGCCTTAAAACAAAATTTAGTGTCTTATGTGCCACAATCGGAAGACGTGGACTGGCAATTTCCGGTCTCTGTTTACGATGTGGTGCTGATGGGGCGCTATGGTTACATGAACTTCCTGCGCCGTCCGAGTGAAACGGACAAACAAAAGGTGCAGGAAGCCATGCAACGGGTGAACATTGAACACCTTGCCCATCGCCAAATCGGCGAGCTTTCCGGTGGGCAAAAAAAACGGGCATTTCTTGCTCGCGCGCTCGCACAACAAAGTAAGATTATTTTATTGGACGAACCTTTCACCGGCGTAGATGTACAAACGGAAAACGCCATTATTGATTTATTAGGTCAGTTACGCAGTGAAGGGCATTTAATTCTGGTTTCCACGCACAATTTAGGTTCCGTGCCGGATTTTTGTGATCGCGTGGTAATGATTAACCGCACGGTAATCGCTGCAGGTTTGACCGAAACTACTTT > 1/1782081‑1782558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |