| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,734,419 | T→G | intergenic (+212/‑72) | unknown → / → unknown | DNA topoisomerase IV subunit A (EC 5.99.1.3)/Glutathione S‑transferase (EC 2.5.1.18) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,734,419 | 0 | T | G | 100.0% | 226.7 / NA | 76 | intergenic (+212/‑72) | unknown/unknown | DNA topoisomerase IV subunit A (EC 5.99.1.3)/Glutathione S‑transferase (EC 2.5.1.18) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (41/35); total (41/35) | |||||||||||
AAATTGAAGTGGTAACACCACAGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATTTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCCTCTACTCGTTGACGGTAATCTTGTAC > 1/1734179‑1734665 | aaaTTGAAGTGGTAACACCACAGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATg < 1:476355/250‑1 (MQ=255) gTGGTAACACCACAGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGAt > 1:877948/1‑241 (MQ=255) tGGTAACACCACAGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGttatttat < 1:194032/250‑1 (MQ=255) caccacAGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACcatca > 1:775507/1‑251 (MQ=255) cacaGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTa < 1:652518/251‑1 (MQ=255) cagTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGc < 1:479694/249‑1 (MQ=255) cTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGttattt < 1:547427/213‑1 (MQ=255) cTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCAtt > 1:272580/1‑251 (MQ=255) cTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCAtt > 1:232051/1‑251 (MQ=255) ctgctATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATGCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGc < 1:684323/220‑1 (MQ=255) aTTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGt > 1:706667/1‑251 (MQ=255) aTTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAatat < 1:395782/251‑1 (MQ=255) aTTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAatat < 1:569172/251‑1 (MQ=255) ttCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGAt < 1:879710/181‑1 (MQ=255) ttCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGc > 1:338582/1‑204 (MQ=255) ctTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGc > 1:719863/1‑163 (MQ=255) cAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATAtttt > 1:552065/1‑214 (MQ=255) aaaCAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGa > 1:19953/1‑251 (MQ=255) aaaCAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGa > 1:761467/1‑251 (MQ=255) aTTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGc > 1:297504/1‑209 (MQ=255) aTTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGc > 1:683850/1‑249 (MQ=255) aTTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGt < 1:345797/212‑1 (MQ=255) gtgtAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTaa < 1:650500/179‑1 (MQ=255) gtgtAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAAc < 1:32131/181‑1 (MQ=255) gtgtAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGt > 1:476178/1‑251 (MQ=255) gtgtAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGt > 1:412992/1‑251 (MQ=255) tgtAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTg < 1:887872/251‑1 (MQ=255) aaCTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGc > 1:719040/1‑118 (MQ=255) aaGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAata > 1:813461/1‑155 (MQ=255) aGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAaga > 1:340822/1‑251 (MQ=255) ccGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGt < 1:479174/251‑1 (MQ=255) cACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTatat < 1:401141/251‑1 (MQ=255) aCGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGc > 1:229500/1‑232 (MQ=255) aCGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAagag < 1:133980/245‑1 (MQ=255) cGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAata < 1:450264/146‑1 (MQ=255) cGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTAc < 1:66745/185‑1 (MQ=255) cGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGa < 1:655960/251‑1 (MQ=255) gTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGc > 1:466948/1‑104 (MQ=255) gTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAaat > 1:236141/1‑114 (MQ=255) gTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCg > 1:309320/1‑186 (MQ=255) gTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGc < 1:356229/194‑1 (MQ=255) gTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGaa > 1:414801/1‑251 (MQ=255) gTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGaa > 1:282123/1‑251 (MQ=255) ttGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAag < 1:735159/251‑1 (MQ=255) ttGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAag > 1:823655/1‑251 (MQ=255) gTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAaatt > 1:736907/1‑112 (MQ=255) gTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGacac > 1:183322/1‑235 (MQ=255) gTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGtat > 1:147012/1‑243 (MQ=255) gTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAag < 1:638130/249‑1 (MQ=255) aTAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATAc < 1:654707/251‑1 (MQ=255) aTGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAAc > 1:799267/1‑134 (MQ=255) tatCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTccc > 1:134444/1‑53 (MQ=255) gATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCg < 1:184011/154‑1 (MQ=255) gATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGa > 1:320240/1‑218 (MQ=255) aTTCAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAgg < 1:613101/251‑1 (MQ=255) cAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAaat < 1:421717/170‑1 (MQ=255) cAATCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGc < 1:270224/251‑1 (MQ=255) aaTCAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTAc > 1:119425/1‑147 (MQ=255) cAGGTGGGCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATg < 1:557921/209‑1 (MQ=255) gggCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCct > 1:481059/1‑249 (MQ=255) gggCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGGCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTc < 1:434415/247‑1 (MQ=255) gCATATTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAata > 1:375339/1‑98 (MQ=255) atatTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACcatca > 1:479389/1‑49 (MQ=255) atatTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGa < 1:215644/172‑1 (MQ=255) atatTACACAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCCTCTACt > 1:473258/1‑250 (MQ=255) acacAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCgg < 1:98796/205‑1 (MQ=255) acacAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGc > 1:171819/1‑217 (MQ=255) acacAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCcac > 1:829802/1‑226 (MQ=255) acacAAATCTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCCTCTACTCGTTGa > 1:14820/1‑251 (MQ=255) cTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGc > 1:347873/1‑209 (MQ=255) cTGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAg > 1:326601/1‑227 (MQ=255) tGCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCCTCTACTCGTTGACGGTAATCt < 1:659438/251‑1 (MQ=255) gCTACAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGt < 1:752205/226‑1 (MQ=255) aCAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGa < 1:841095/154‑1 (MQ=255) cAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGc > 1:325160/1‑203 (MQ=255) cAATGTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCCTCTACTCGTTGACGGTAATCTTGTAc < 1:873154/251‑1 (MQ=255) | AAATTGAAGTGGTAACACCACAGCAGTGAAAATCTTAAATTGCACTTAAAGGCTGCTATTCGCATTCTTTCATGAGGAACTGCGGTTATTTTTACCGGTGTTTTTTTCTCTTACAATAAACAAGATAGAAAGAATTTTATTCACTACTGAGTGTAACTAAGCCGGCACGTTGTATATATCCATAAATGGAAATATCAATAGATTCAATCAGGTGGGCATATTACACAAATCTGCTACAATTTCCCTGATGGTTATTTATACCATCATTAAGCAGGCAAAAATTGTAATTGTCATTTTATTCAAGGAGTTAATATGAAACTATATTTTAAACCGGGTGCATGCTCATTCGTACCGCATTTCGCATTGGAAAAAATCAATCAGCCTTATGAAGCCGAAGCAGTGACACAAGAGTATATGAAGAGCCCGGAATACTTAGAGCTCAATCCACAAGGTGCAGTTCCTCTACTCGTTGACGGTAATCTTGTAC > 1/1734179‑1734665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |