| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,628,475 | G→A | A56A (GCG→GCA) | unknown → | DNA uptake protein and related DNA‑binding proteins |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,628,475 | 0 | G | A | 98.7% | 215.7 / NA | 76 | A56A (GCG→GCA) | unknown | DNA uptake protein and related DNA‑binding proteins |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (43/32); total (44/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCGGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATAC > 1/1628241‑1628715 | tttCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGcc > 1:720879/1‑250 (MQ=255) gCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTa > 1:831153/1‑251 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAgg > 1:408407/1‑250 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAgg > 1:328714/1‑250 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc < 1:705/251‑1 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc < 1:896301/251‑1 (MQ=255) aGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCa > 1:277347/1‑251 (MQ=255) gTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCAt > 1:559355/1‑251 (MQ=255) gTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGGGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTg > 1:307317/1‑244 (MQ=255) ttttgtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAaagcggaagcgg < 1:431931/250‑1 (MQ=255) gtttgtttTAACTTTAGTCAGAAAAGGAATCACTATAAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAAAAAGTGAATATTAACACCGCCAGTGCTGCAGAAAtt < 1:458700/208‑1 (MQ=255) gtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc < 1:211190/222‑1 (MQ=255) gtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGc > 1:297707/1‑230 (MQ=255) gtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCggtggg > 1:95623/1‑250 (MQ=255) tttAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGACCCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGc < 1:585417/251‑1 (MQ=255) cTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTGGGCTTCGCTGTTCGTGTTAGGTTCGGGGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTAt < 1:392552/251‑1 (MQ=255) tCAGAAAAGGAATCCCTATGAAAGCAATGAACCATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGACCCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGa < 1:307330/250‑1 (MQ=255) aGGAATCACTATGAAAGCAATGAACCATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTAt < 1:869125/238‑1 (MQ=255) cACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAtt > 1:602078/1‑251 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAg > 1:466289/1‑227 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAttt > 1:47401/1‑250 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAttt > 1:249682/1‑250 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAttt > 1:380435/1‑250 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGGGAGAAAGTGAATATTAACACCGCCAGTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGGGAAAAACACGGTAAttt > 1:442659/1‑250 (MQ=255) aGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc > 1:411047/1‑187 (MQ=255) aTGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTggg > 1:468797/1‑250 (MQ=255) tCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAgcgc < 1:741453/237‑1 (MQ=255) cTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAg > 1:345451/1‑172 (MQ=255) gCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAGGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAg < 1:521201/250‑1 (MQ=255) gCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACCGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGCGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGGGGTGCAGTATCGGGAAAAACACGGTAATTTCAGCTCCGGGGAGCAGTTGCTGGAAg > 1:662299/1‑250 (MQ=255) tCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCa > 1:550810/1‑251 (MQ=255) cTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGa > 1:98025/1‑242 (MQ=255) tGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTGGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGc < 1:339686/251‑1 (MQ=255) gTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGTGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAg < 1:442844/232‑1 (MQ=255) gTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTAt > 1:727664/1‑196 (MQ=255) ttCGTGTTAGGTTCGGTGTTTGCGGTTTCTGCCGTGGCGGCGAAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGAAACGGCAGCGGTCGGTGAGAAAGTAAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCAt < 1:737230/251‑1 (MQ=255) tGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGaaa > 1:96406/1‑251 (MQ=255) gTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAAt > 1:169252/1‑251 (MQ=255) ttCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAAt < 1:846842/250‑1 (MQ=255) ttCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAAt > 1:185090/1‑250 (MQ=255) gCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGGGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGa > 1:481310/1‑251 (MQ=255) gCGGCTGAACGGGCGGTAAAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATaa < 1:405634/249‑1 (MQ=255) gCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAAt > 1:359199/1‑250 (MQ=255) aacgggcggTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTccc < 1:265864/247‑1 (MQ=255) cggTACAAACGGAGCAGCGGGTTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAgt < 1:57009/251‑1 (MQ=255) gTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGc < 1:153961/192‑1 (MQ=255) tACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAgttgt > 1:396418/1‑251 (MQ=255) cAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCt > 1:269059/1‑234 (MQ=255) aaaCGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAgttgttgt > 1:719934/1‑251 (MQ=255) gAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTaa > 1:105697/1‑251 (MQ=255) agcCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCa > 1:183111/1‑251 (MQ=255) gcCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCaa > 1:235990/1‑251 (MQ=255) cgggctgcAACGGCGGCGGTGGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGc < 1:363739/242‑1 (MQ=255) ccggctacAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGc < 1:611456/241‑1 (MQ=255) cgttcggtaaaaaaGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTc < 1:159967/238‑1 (MQ=255) gtcggtGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCg > 1:371326/1‑251 (MQ=255) gtGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCtt > 1:204674/1‑193 (MQ=255) gtGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAAt > 1:519892/1‑198 (MQ=255) gtGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCtt > 1:238084/1‑251 (MQ=255) gTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGa > 1:843402/1‑131 (MQ=255) gTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATg < 1:74416/217‑1 (MQ=255) gTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCACGACCGTATCGCCTTATAATCTTTTCCCTTTAgttg > 1:447567/1‑206 (MQ=255) atatTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGgcg > 1:211005/1‑251 (MQ=255) tatTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTg < 1:672619/86‑1 (MQ=255) tatTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAgcgc < 1:202863/108‑1 (MQ=255) tatTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGgcg > 1:707856/1‑250 (MQ=255) aaCACCGCCAGTGCTGCAGAATTTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGAc > 1:592455/1‑214 (MQ=255) aaCACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGtt > 1:616242/1‑251 (MQ=255) ccGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTataa < 1:242476/251‑1 (MQ=255) ccGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTataa < 1:289781/251‑1 (MQ=255) ccGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTataa > 1:530146/1‑251 (MQ=255) cGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGc < 1:319331/107‑1 (MQ=255) ccAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTataata < 1:618136/250‑1 (MQ=255) ccAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATAc < 1:752074/251‑1 (MQ=255) ccAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATAc < 1:873664/251‑1 (MQ=255) ccAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATAc < 1:445981/251‑1 (MQ=255) | TTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCGGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATAC > 1/1628241‑1628715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |