| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,614,268 | G→C | intergenic (+40/‑91) | unknown → / → unknown | Outer membrane beta‑barrel assembly protein BamC/Outer membrane beta‑barrel assembly protein BamC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,614,268 | 0 | G | C | 97.9% | 132.8 / ‑6.2 | 48 | intergenic (+40/‑91) | unknown/unknown | Outer membrane beta‑barrel assembly protein BamC/Outer membrane beta‑barrel assembly protein BamC |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (29/18); total (29/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAATGAAACGTGATGACACCATTTTCACGCCGGATTTTACGGACAGGCAACGCTACGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTGGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCTTATTTATCAAGCGTTGCAGAATGT > 1/1614029‑1614504 | aaaTGAAACGTGATGACACCATTTTCACGCCGGATTTTACGGACAGGCAACGCTACGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAAt > 1:50587/1‑251 (MQ=255) ccATTTTCACGCCGGATTTTACGGACAGGCAACGCTACGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAg > 1:166611/1‑251 (MQ=255) ggCAACGCTACGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACaa > 1:744778/1‑251 (MQ=255) cTACGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTa > 1:605359/1‑251 (MQ=255) aCGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATc < 1:233925/251‑1 (MQ=255) aTCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACaagaag < 1:681569/250‑1 (MQ=255) tCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAgaagaa < 1:170551/251‑1 (MQ=255) cTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTAc > 1:38056/1‑227 (MQ=255) aaTTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCgtgt > 1:584807/1‑251 (MQ=255) tggGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa < 1:236546/250‑1 (MQ=255) tggGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa < 1:243987/250‑1 (MQ=255) tggGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa < 1:602736/250‑1 (MQ=255) gggggAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATg > 1:63932/1‑251 (MQ=255) attgaattCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAg > 1:834461/1‑248 (MQ=255) gaattCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa > 1:189550/1‑240 (MQ=255) ttACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGaa < 1:882258/251‑1 (MQ=255) aCCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATca > 1:781485/1‑204 (MQ=255) aCCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa > 1:309955/1‑229 (MQ=255) gATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAAcc < 1:698633/180‑1 (MQ=255) gATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa < 1:381407/212‑1 (MQ=255) aTCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGc < 1:62654/250‑1 (MQ=255) tCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAgaagaa > 1:281850/1‑194 (MQ=255) tAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAgg > 1:99777/1‑232 (MQ=255) ctcctcACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGc > 1:651662/1‑234 (MQ=255) cctcACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTaa > 1:563029/1‑251 (MQ=255) cACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTcg > 1:450762/1‑140 (MQ=255) gACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGaaa > 1:757088/1‑251 (MQ=255) aCGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGaaaa > 1:293221/1‑251 (MQ=255) gCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATc > 1:528549/1‑135 (MQ=255) cGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa > 1:226304/1‑156 (MQ=255) gCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa > 1:806969/1‑154 (MQ=255) aCATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCgg < 1:326312/248‑1 (MQ=255) aCATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGG‑AAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGa < 1:206510/250‑1 (MQ=255) catcatTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa < 1:867469/141‑1 (MQ=255) catcatTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGaa > 1:744936/1‑251 (MQ=255) tcatTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACa > 1:207638/1‑251 (MQ=255) tcatTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTA‑TTCCGAAGAAAATAAAAACGCCCTCCCCGGCGAACAg > 1:89478/1‑251 (MQ=255) catTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAg > 1:131386/1‑251 (MQ=255) atTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAgg > 1:208348/1‑251 (MQ=255) tGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGca > 1:711837/1‑250 (MQ=255) gCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGaa > 1:704822/1‑127 (MQ=255) ccTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCttatt < 1:765338/251‑1 (MQ=255) cggCAGGGTTTTGGTTCCGCCCTGCCGAAACTGGGCTTTGAAATTCAAGAAAAAACCCGCAGCCGAGGCATTCGCGGGTTAGAGTACAAAACTTTAACGCAAGAAGGATGGCGCCGTGTAGGAATACAGCTACCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCttattta < 1:339745/250‑1 (MQ=255) gCAGCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTGCCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCttatttat < 1:888223/250‑1 (MQ=255) gCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGc < 1:860925/158‑1 (MQ=255) gCGTTTAGGTTCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACaa < 1:747051/181‑1 (MQ=255) ttCCGCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCTTATTTATCAAGCGTTGCAg < 1:170217/250‑1 (MQ=255) gCTCTGCCGAAACTCGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCTTATTTATCAAGCGTTGCAGAATGt > 1:401289/1‑251 (MQ=255) | AAATGAAACGTGATGACACCATTTTCACGCCGGATTTTACGGACAGGCAACGCTACGCCTCCGATCGCTTAAATCAATTGGTGGGGGAATTGAATTCCGCTTACCAAAAACAACAGCAGGATCTTAACGGCGCAGCCTCCTCACCAATTCAGTCCGCCATCGCCACCGACGCCAACGGCAGAACCGCAGACATCATTTGATAACGCCTGGCAGCGTTTAGGTTCCGCTCTGCCGAAACTGGGCTTTGAAATTCAGGAAGAAACCGGCAGCCGAGGCATTCGCGAGTTAGAGTACAAACCTTTATCACAAGAAGAATGGCGCCGTGTAGGAATGCAGCTGCCGGACTTGGAAAAAGGCACTTACCAAATGCAGCTTGCCGCTGTAGGTAAACAAAGTGCGGTGGTTATTTCCGACGAAAATAAAACCGCCCTCTCCGGCGAACAGGCACAGCTTATTTATCAAGCGTTGCAGAATGT > 1/1614029‑1614504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |