| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,581,314 | C→T | E237K (GAA→AAA) | unknown ← | Guanosine‑3',5'‑bis(diphosphate) 3'‑pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,581,314 | 0 | C | T | 100.0% | 219.8 / NA | 74 | E237K (GAA→AAA) | unknown | Guanosine‑3',5'‑bis(diphosphate) 3'‑pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (46/28); total (46/28) | |||||||||||
GTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAGAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTCACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGG > 1/1581081‑1581558 | gTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCcgcg > 1:719484/1‑251 (MQ=255) aTGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCa > 1:476598/1‑251 (MQ=255) tGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACAt < 1:700758/244‑1 (MQ=255) tGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCaa > 1:462924/1‑251 (MQ=255) aCTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGcc > 1:99793/1‑249 (MQ=255) cTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCa < 1:704302/242‑1 (MQ=255) tAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGAt < 1:885516/251‑1 (MQ=255) ggCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCgg > 1:850191/1‑251 (MQ=255) gcaATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATAc > 1:121963/1‑205 (MQ=255) gcaATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACAt > 1:346955/1‑211 (MQ=255) atatAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATACTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCAt > 1:435034/1‑251 (MQ=255) acccgGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTc < 1:176756/237‑1 (MQ=255) acccgGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACcg > 1:550091/1‑250 (MQ=255) tataAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACg > 1:597052/1‑251 (MQ=255) ggCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACtttt > 1:574226/1‑251 (MQ=255) gCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTc > 1:518560/1‑216 (MQ=255) gCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTAc < 1:566737/227‑1 (MQ=255) gCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACtt > 1:600424/1‑243 (MQ=255) gCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCaaa > 1:81370/1‑251 (MQ=255) gCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTCTTGGCAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCTTTCAATCATGTCTTTGCGATTACCCCCCGCAATCTGACCGCCTTTTGGCaaa > 1:685426/1‑251 (MQ=255) aTTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAAc < 1:565457/251‑1 (MQ=255) gCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAAc < 1:332959/249‑1 (MQ=255) acacGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCa > 1:610913/1‑157 (MQ=255) cacGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATcc > 1:731225/1‑152 (MQ=255) cacGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTg > 1:55834/1‑250 (MQ=255) cacGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTg > 1:156753/1‑250 (MQ=255) cGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTAc < 1:597928/205‑1 (MQ=255) cGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTa < 1:328831/220‑1 (MQ=255) cGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCgg > 1:795504/1‑251 (MQ=255) ggTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATgg > 1:129726/1‑251 (MQ=255) gTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATc < 1:830558/207‑1 (MQ=255) gTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATgg < 1:43460/250‑1 (MQ=255) tCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGAt > 1:415989/1‑190 (MQ=255) gttCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATAc > 1:292577/1‑122 (MQ=255) gttCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTAc < 1:20843/185‑1 (MQ=255) gttCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCaa > 1:62591/1‑251 (MQ=255) tCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGa > 1:16496/1‑251 (MQ=255) cGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTcc < 1:253913/251‑1 (MQ=255) gTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGa > 1:471004/1‑222 (MQ=255) gTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAg > 1:400510/1‑251 (MQ=255) tGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATGCATGGCTTCAAAACCAAGATCTTCCAg < 1:741625/250‑1 (MQ=255) cgcgTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTc > 1:846325/1‑156 (MQ=255) gcgTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATc > 1:110513/1‑236 (MQ=255) gcgTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGttttt > 1:80084/1‑251 (MQ=255) gcgTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGttttt > 1:856662/1‑251 (MQ=255) cgTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACa > 1:56064/1‑216 (MQ=255) cgTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGtt > 1:398731/1‑243 (MQ=255) tAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGAc > 1:830507/1‑182 (MQ=255) tAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGAt > 1:466963/1‑251 (MQ=255) atCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATTCCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATc < 1:118447/169‑1 (MQ=255) ccATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTa < 1:662275/171‑1 (MQ=255) ccATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGt < 1:853690/197‑1 (MQ=255) tAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAg > 1:215444/1‑229 (MQ=255) aTGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATcc > 1:706129/1‑250 (MQ=255) ggAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCa > 1:257088/1‑251 (MQ=255) gAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCaa > 1:674996/1‑251 (MQ=255) gAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCaa > 1:357349/1‑251 (MQ=255) gAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGC‑AACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGAtg > 1:336593/1‑236 (MQ=255) aaTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAg < 1:48880/251‑1 (MQ=255) aaTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAg < 1:306005/251‑1 (MQ=255) aTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAg > 1:251912/1‑250 (MQ=255) aTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGc < 1:322139/251‑1 (MQ=255) aTCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAAc < 1:416900/250‑1 (MQ=255) tCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACgg < 1:409065/251‑1 (MQ=255) tttAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACggcg > 1:901830/1‑248 (MQ=255) cgcATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCCTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATaaa < 1:451715/250‑1 (MQ=255) ttttGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAg < 1:222740/222‑1 (MQ=255) gCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTgg > 1:732024/1‑250 (MQ=255) gCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTgg > 1:224220/1‑250 (MQ=255) aTACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCaaaa < 1:726862/166‑1 (MQ=255) aTACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGAtg < 1:636516/193‑1 (MQ=255) tACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGAt > 1:524674/1‑251 (MQ=255) aaTGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATacga < 1:371695/251‑1 (MQ=255) cTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACgg < 1:559403/250‑1 (MQ=255) | GTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAGAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTCACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGG > 1/1581081‑1581558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |