| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,561,994 | A→G | L115P (CTG→CCG) | unknown ← | Phosphoglycerate transport regulatory protein PgtC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,561,994 | 0 | A | G | 100.0% | 236.7 / NA | 83 | L115P (CTG→CCG) | unknown | Phosphoglycerate transport regulatory protein PgtC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (46/37); total (46/37) | |||||||||||
ATTAATGCCCAACCTTGCTGCCAGCCCTGTTTCTGTAATAATGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCAGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAGGGACTCCGGTGAAAATGTCGTAC > 1/1561760‑1562237 | aTTAATGCCCAACCTTGCTGCCAGCCCTGTTTCTGTAATAATGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTcc < 1:494532/251‑1 (MQ=255)aTTAATGCCCAACCTTGCTGCCAGCCCTGTTTCTGTAATAATGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTc > 1:624724/1‑250 (MQ=255) ttAATGCCCAACCTTGCTGCCAGCCCTGTTTCTGTAATAATGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTc > 1:511182/1‑249 (MQ=255) aaCCTTGCTGCCAGCCCTGTTTCTGTAATAATGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAAt < 1:185618/251‑1 (MQ=255) tGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGttttt < 1:460800/251‑1 (MQ=255) aTCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCaa > 1:844784/1‑251 (MQ=255) gCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCCATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATaaaa > 1:736280/1‑250 (MQ=255) cgtcgtATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCGGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAAc < 1:470049/250‑1 (MQ=255) tcgtATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAAt > 1:790968/1‑200 (MQ=255) tATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGttt > 1:271911/1‑226 (MQ=255) tATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCAt < 1:399200/250‑1 (MQ=255) tATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCAt < 1:645422/250‑1 (MQ=255) tATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATa > 1:95350/1‑251 (MQ=255) tATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATa > 1:679746/1‑251 (MQ=255) tCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAgg < 1:171935/251‑1 (MQ=255) gAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgaga > 1:894490/1‑251 (MQ=255) gAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag < 1:415440/250‑1 (MQ=255) gAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag < 1:406300/250‑1 (MQ=255) gAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag < 1:375142/250‑1 (MQ=255) gCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGaa > 1:92124/1‑250 (MQ=255) cTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAAc < 1:230435/250‑1 (MQ=255) ggACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag > 1:845913/1‑241 (MQ=255) gACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTaaa > 1:864691/1‑251 (MQ=255) actCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTcc > 1:636146/1‑211 (MQ=255) actCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAAc > 1:267568/1‑226 (MQ=255) actCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCAt < 1:768007/231‑1 (MQ=255) actCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag < 1:714618/236‑1 (MQ=255) cATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTGAAACAAGAt > 1:457586/1‑251 (MQ=255) ataataACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGAt > 1:711230/1‑250 (MQ=255) aaCCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATaaa < 1:842813/215‑1 (MQ=255) aaCCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGaa > 1:393075/1‑232 (MQ=255) aaCCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAatat > 1:72334/1‑251 (MQ=255) aCCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag < 1:809953/226‑1 (MQ=255) cAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAAtattat < 1:110892/251‑1 (MQ=255) ccTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGttt < 1:430440/251‑1 (MQ=255) aaaTAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAAt > 1:425782/1‑251 (MQ=255) aTAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAg < 1:643086/251‑1 (MQ=255) aaGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAgtt < 1:600814/251‑1 (MQ=255) aGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAgttt > 1:57146/1‑251 (MQ=255) cccGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAAc > 1:298916/1‑187 (MQ=255) ggACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAAc > 1:796637/1‑207 (MQ=255) ccAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATg < 1:854117/251‑1 (MQ=255) gtcagtAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGAt > 1:428668/1‑173 (MQ=255) gtcagtAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACa > 1:770921/1‑202 (MQ=255) tcagtAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGa < 1:684426/248‑1 (MQ=255) aGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag < 1:207076/182‑1 (MQ=255) ggAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGt > 1:118202/1‑251 (MQ=255) aaCATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTc < 1:10260/251‑1 (MQ=255) aTCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAgttt < 1:180138/228‑1 (MQ=255) cTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAg > 1:304671/1‑250 (MQ=255) tCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCAt < 1:892605/251‑1 (MQ=255) tCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCAt < 1:213473/251‑1 (MQ=255) tCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACAGCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCAt < 1:772294/251‑1 (MQ=255) gCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGgag > 1:505131/1‑166 (MQ=255) gCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGa > 1:558059/1‑227 (MQ=255) aTTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTg < 1:659426/229‑1 (MQ=255) ttttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTAt > 1:193204/1‑251 (MQ=255) ttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCaa > 1:348019/1‑114 (MQ=255) ttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGa < 1:68155/222‑1 (MQ=255) ttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTc > 1:815097/1‑233 (MQ=255) ttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCAt > 1:545177/1‑243 (MQ=255) ttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCg > 1:791814/1‑251 (MQ=255) ttCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCg > 1:220751/1‑251 (MQ=255) gtagtGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAg < 1:203306/205‑1 (MQ=255) gtGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAatat > 1:627426/1‑177 (MQ=255) gtGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTc > 1:605547/1‑237 (MQ=255) aaaaaaTACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTc < 1:606860/115‑1 (MQ=255) aaaaaaTACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCtt < 1:188478/250‑1 (MQ=255) aaaaaaTACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCtt < 1:640960/250‑1 (MQ=255) aaaTACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAAc < 1:782750/128‑1 (MQ=255) aaaTACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCg > 1:125635/1‑176 (MQ=255) tACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTa < 1:728206/222‑1 (MQ=255) caTCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGt > 1:750746/1‑251 (MQ=255) tCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAAc > 1:466519/1‑118 (MQ=255) tCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTaa > 1:670921/1‑251 (MQ=255) tCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAA‑TTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAAt > 1:151998/1‑251 (MQ=255) aTGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAgg > 1:635263/1‑251 (MQ=255) tGCTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAggg > 1:156477/1‑251 (MQ=255) cTACGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAg > 1:247373/1‑243 (MQ=255) cGGTTGTTTTTTGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAgtttgttt > 1:344531/1‑164 (MQ=255) tttttGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAGGGACTCCGGTGaaa < 1:240996/251‑1 (MQ=255) ttGTAAAATCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAGGGACTc > 1:300592/1‑240 (MQ=255) aaTCTCCGGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAGGGACTCCGGTGAAAATGTCGTAc < 1:276653/251‑1 (MQ=255) | ATTAATGCCCAACCTTGCTGCCAGCCCTGTTTCTGTAATAATGCCTCAATCATAATGTGCGTCGTATCGGAACGGCTCGGACTACTCATAATAACCAATCCCTGCAAATTGGGAGAAATAAGCCCGGACCAGTCAGTAGGAACATCCACTTCTGCATTTTCCAGTAGTGCTACATTGGAAAAAATACCACATCCCGATAGTGAAAATGCTACGGTTGTTTTTTGTAAAATCTCCAGTACGAATTTTTTTCCTTGGCTGAATTTATCCGGCAAAGCAGCCAATCGTTGTTTTTCCTGCAAGTGATAAAACAGCATAGGAGAGGAACTTAAAACAAGATCAATATTATCGTTTTTTTCGTCATCAAATAGTTTGTTTAATGAGTTGCTTGTTCTGTTTAGCATTCTTATCGACGTGGCATTCGGTTGCTTTTCCCACTCGGTAATTAAATAAGAAAGGGACTCCGGTGAAAATGTCGTAC > 1/1561760‑1562237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |