| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,533,644 | C→A | P435P (CCG→CCT) | unknown ← | tRNA 4‑thiouridine synthase (EC 2.8.1.4) / Rhodanese‑like domain required for thiamine synthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,533,644 | 0 | C | A | 100.0% | 191.3 / NA | 67 | P435P (CCG→CCT) | unknown | tRNA 4‑thiouridine synthase (EC 2.8.1.4) / Rhodanese‑like domain required for thiamine synthesis |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (31/36); total (31/36) | |||||||||||
GTAATGATTGAAATAAAAAAGTGCGGTCGGTTTTCCCAACGTTTTTTCATCGTGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAACGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCCTTCTTCCTGCTCGATTTTCGCTTTGAT > 1/1533404‑1533883 | gTAATGATTGAAATAAAAAAGTGCGGTCGGTTTTCCCAACGTTTTTTCATCGTGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACaaaa > 1:689831/1‑251 (MQ=255) aaGTGCGGTCGGTTTTCCCAACGTTTTTTCATCGTGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCaa < 1:162231/251‑1 (MQ=255) cggtcggtTTTCCCAACGTTTTTTCATCGTGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGt < 1:245251/251‑1 (MQ=255) tCCCAACGTTTTTTCATCGTGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGttttt > 1:750899/1‑251 (MQ=255) tGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGc < 1:715807/250‑1 (MQ=255) tCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCAt < 1:480819/251‑1 (MQ=255) gCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCa > 1:46286/1‑251 (MQ=255) gAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGc > 1:562469/1‑211 (MQ=255) gTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGc > 1:691737/1‑207 (MQ=255) tATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATgg < 1:113446/251‑1 (MQ=255) ttGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACGGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGAc < 1:83716/251‑1 (MQ=255) tGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACg < 1:298600/251‑1 (MQ=255) ccTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGc < 1:577443/227‑1 (MQ=255) ccTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAac > 1:589423/1‑250 (MQ=255) ccTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAac > 1:785366/1‑250 (MQ=255) ccTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAac > 1:135388/1‑250 (MQ=255) tCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAaccacc < 1:54920/251‑1 (MQ=255) caTTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCAc > 1:505524/1‑205 (MQ=255) attaAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCaa > 1:479199/1‑149 (MQ=255) attaAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCgat < 1:698663/195‑1 (MQ=255) attaAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACg > 1:836790/1‑202 (MQ=255) attaAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCttt > 1:235821/1‑249 (MQ=255) attaAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTtct < 1:173945/251‑1 (MQ=255) ttaAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTtctc < 1:584413/251‑1 (MQ=255) ctctTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGAc < 1:801659/222‑1 (MQ=255) ctTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTa < 1:630237/215‑1 (MQ=255) ttCAAATACAGCGCCTGTAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGAt > 1:508112/1‑251 (MQ=255) ttCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGc > 1:295531/1‑141 (MQ=255) ttCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTa > 1:162919/1‑213 (MQ=255) ttCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGAt > 1:340778/1‑251 (MQ=255) ttCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGAt > 1:738295/1‑251 (MQ=255) ttCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGAt > 1:411965/1‑251 (MQ=255) ttCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGAt > 1:287719/1‑251 (MQ=255) cgcCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTtcctcc < 1:59699/151‑1 (MQ=255) cAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAat < 1:382880/251‑1 (MQ=255) cAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAat < 1:412205/251‑1 (MQ=255) aTTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:297512/251‑1 (MQ=255) aTTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:803381/251‑1 (MQ=255) aTTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:783636/251‑1 (MQ=255) aTTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:297947/251‑1 (MQ=255) aTTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:605959/251‑1 (MQ=255) gCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGATGCCCAGCACGGaaa > 1:454250/1‑185 (MQ=255) cTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTgcgc < 1:281526/251‑1 (MQ=255) ttCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCAc < 1:740305/251‑1 (MQ=255) tCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat > 1:259891/1‑231 (MQ=255) tCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGAATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCa > 1:610928/1‑249 (MQ=255) cAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGATTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACttt > 1:567235/1‑250 (MQ=255) aTACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGa > 1:413759/1‑162 (MQ=255) aTACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:781983/226‑1 (MQ=255) aCAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTGAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCGCCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAatat < 1:443633/224‑1 (MQ=255) gCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGaaa < 1:635090/159‑1 (MQ=255) gCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAacac > 1:353302/1‑250 (MQ=255) cacaTAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAacac < 1:753549/249‑1 (MQ=255) cacaTAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAacac < 1:644009/249‑1 (MQ=255) cacaTAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAac < 1:171972/247‑1 (MQ=255) gTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAg < 1:339502/144‑1 (MQ=255) tttttGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAaaat < 1:202144/250‑1 (MQ=255) tttttGCTTTGATCCAGTTCGGCAAAGTGATTGGACAGAGTGAAAAAAGGCAAAAAAATCATCGTAGGCTTGTCAATATGTAGCGGTTTTTCGGCGAGGACCTCCGGGATGCGGATGTCGAACATCAAGACATTGATGCCCAGCAAGGACATGGTATAGACGGAAACCACAGATTTCTCCGTCTGATCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTATCCAACACGGCAatatt > 1:725796/1‑251 (MQ=255) gCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTg < 1:769852/210‑1 (MQ=255) gATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCAtttt < 1:81426/213‑1 (MQ=255) aTCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCctt > 1:120360/1‑251 (MQ=255) ggCAAATTGATTGGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCCTTCTTCCTg > 1:229202/1‑249 (MQ=255) ttgattgGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTtctc > 1:848277/1‑153 (MQ=255) gattgGACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCCTTCTTCCTGCTCGAtttt > 1:818451/1‑250 (MQ=255) gACAGTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCCTTCTTCCTGCTCGATTTTCGCttt > 1:162091/1‑251 (MQ=255) gTTTGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAacac < 1:344842/205‑1 (MQ=255) tttGTAAAAAGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGGACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCCTTCTTCCTGCTCGATTTTCGCTTTGAt < 1:896547/249‑1 (MQ=255) | GTAATGATTGAAATAAAAAAGTGCGGTCGGTTTTCCCAACGTTTTTTCATCGTGAAAACCCACCGCACTTTTGATTCGAGGAAGGCATTAGGAAAGTATCTTTTTGAACACCTTCACATTATTAAATCCACTCTCTTTCAAATACAGCGCCTGCAATTTGCTCATCACGCCGCGTTCGCAATACAGCACATAGTTTTTGCTTTGATCCAGTTCGGCAAATTGATTGGACAGTTTGTAAAACGGCAACAAAATCATCGTTTGCTTTTCAATATGTAGCGGTTTTTCGTCGATTTCCTCCGGGCTGCGGATGTCGATGATCACGTCATTGGTGCCCAGCACGGAAATGGTATCGACGGAAACCACCTCTTTCTCCGTCTGCTCGGCGATTTGACGAATATCCAAATATTGCGCATTTTCCACCGCACTTTCCAACACGGCAAAATTGAAATTGCCTTCTTCCTGCTCGATTTTCGCTTTGAT > 1/1533404‑1533883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |