| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,472,236 | C→T | A384V (GCC→GTC) | unknown → | Efflux transport system, outer membrane factor (OMF) lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,472,236 | 0 | C | T | 100.0% | 152.3 / NA | 55 | A384V (GCC→GTC) | unknown | Efflux transport system, outer membrane factor (OMF) lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/47); total (8/47) | |||||||||||
ACTGGCTTCTGCCAAAGCGGATTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGCCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGCCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGTATAAAGCACTAGG > 1/1472003‑1472482 | aCTGGCTTCTGCCAAAGCGGATTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATa < 1:372997/251‑1 (MQ=255) cTTCTGCCAAAGCGGATTTATCCCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCATTTTGTTGAGCCTCGACATTGGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGTAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAg < 1:370364/250‑1 (MQ=255) cTTCTGCCAAAGCGGATTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAg < 1:811764/250‑1 (MQ=255) cTTCTGCCAAAGCGGATTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAg < 1:160731/250‑1 (MQ=255) ccAAAGCGGATTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCa < 1:176992/250‑1 (MQ=255) aTTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGTTTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGc < 1:115444/250‑1 (MQ=255) aTTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAAc < 1:298790/233‑1 (MQ=255) ataCCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCAt > 1:370634/1‑251 (MQ=255) cgcgCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAAt < 1:584252/251‑1 (MQ=255) cgcTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAAt < 1:263495/249‑1 (MQ=255) gACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAAc < 1:174529/250‑1 (MQ=255) gACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATa < 1:443617/181‑1 (MQ=255) cAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAAc < 1:229047/228‑1 (MQ=255) acacGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCa < 1:824816/184‑1 (MQ=255) cGGACATTCCGGATTTAAAGGGTTGGGTCAATTTGTGGGGCCTCGACATTGGCCTGCCGATGTTCACTAACGGACGCATTCAAGCCAACATAGACGCCACCGACACCCGCCTGAAAGCGGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAgcaggca < 1:840557/251‑1 (MQ=255) gACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAg < 1:271539/173‑1 (MQ=255) aCATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGcaggcagg < 1:641742/250‑1 (MQ=255) ccGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCg < 1:11560/251‑1 (MQ=255) gggCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAAt < 1:617917/175‑1 (MQ=255) gggCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAAc < 1:502796/250‑1 (MQ=255) ttgttgAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTAttt < 1:462303/240‑1 (MQ=255) aCATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAgcaggc < 1:657373/205‑1 (MQ=255) aCATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGAc < 1:401574/251‑1 (MQ=255) cATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACa < 1:347028/251‑1 (MQ=255) aGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGc < 1:772407/166‑1 (MQ=255) ccTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACgtc < 1:226484/250‑3 (MQ=255) aaCGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAg < 1:281196/100‑1 (MQ=255) gACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCGGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGc < 1:49252/250‑1 (MQ=255) aTTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAAc < 1:450255/96‑1 (MQ=255) cccAACATTGACGCCGCCGCCGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCa < 1:132353/250‑1 (MQ=255) cccAACATTGACGCCCCCGCCGCCCGCCTGAAAGCTGCCTTCCTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCa < 1:120291/250‑1 (MQ=255) aCATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACa < 1:147234/148‑1 (MQ=255) aCATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCg < 1:316781/173‑1 (MQ=255) aCATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAAc < 1:783760/251‑1 (MQ=255) cATTGCCGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAAcc < 1:327917/251‑1 (MQ=255) cgccgACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATcc < 1:66912/251‑1 (MQ=255) aCGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAg < 1:402007/250‑1 (MQ=255) ccTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCa > 1:83448/1‑225 (MQ=255) ccTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAg > 1:66295/1‑251 (MQ=255) gCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGcac < 1:712845/67‑1 (MQ=255) gCCTTACTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCgaa > 1:669854/1‑251 (MQ=255) aCTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCAc > 1:401820/1‑183 (MQ=255) aCTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAAc > 1:774988/1‑218 (MQ=255) cTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGc < 1:492226/228‑1 (MQ=255) cTTCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAAttt > 1:785036/1‑251 (MQ=255) tCAATACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGa < 1:406841/251‑1 (MQ=255) aaTACGACAAAGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGAtt < 1:178532/251‑1 (MQ=255) aaGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGtat < 1:272062/251‑1 (MQ=255) aaGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGtat < 1:126934/251‑1 (MQ=255) aaGGCTTGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGtat < 1:721070/251‑1 (MQ=255) ttGCTGCAAGTCCTTGCCGATGTAGATACCAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGTATAAAGc < 1:445219/251‑1 (MQ=255) ttGCTGCAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGTATAAAGc < 1:727317/251‑1 (MQ=255) ctgcAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTAc < 1:471006/186‑1 (MQ=255) ctgcAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGTATAAAGCa > 1:772419/1‑249 (MQ=255) cAAGTCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGTCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGTATAAAGCACTAgg < 1:737988/251‑1 (MQ=255) | ACTGGCTTCTGCCAAAGCGGATTTATACCCGCGCTTTGAGATTCAATTTTTAGGACAAACAGGGCGCATTGACATCAACACGGACATTCCCGATTTAAAAGGTTGGGGCAATTTGTTGAGCCTCGACATTAGCCTGCCGATTTTCACTAACGGACGCATTCAAGCCAACATTGACGCCGCCGACGCCCGCCTGAAAGCTGCCTTACTTCAATACGACAAAGGCTTGCTGCAAGCCCTTGCCGATGTAGATAACAGCTATCAGGCACAAGCCGCATTAAATCGCCAAACCCAATTGCTACAAACCGCCTGCCAACAGGCGCAAAAGCAGGCAGGCAATGCGGAGAAATTATTTAACTACGGCGAAAAAACCTTAGACAACGCCCTCACCGCCCGCCTCACCGCACTGGATTACCAAAACCAACTCATCCAAAGCCGTTTAGCGGGGGCGAAGAATTTGATTAGTTTGTATAAAGCACTAGG > 1/1472003‑1472482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |