| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,466,929 | A→C | I240I (ATA→ATC) | unknown → | HlyD‑like membrane fusion protein YhiI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,466,929 | 0 | A | C | 100.0% | 237.5 / NA | 83 | I240I (ATA→ATC) | unknown | HlyD‑like membrane fusion protein YhiI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (32/51); total (32/51) | |||||||||||
CCGAAGCACAAGCCGCCGTCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATAGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGCACAGTTAAACGTG > 1/1466685‑1467169 | ccGAAGCACAAGCCGCCGTCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGtgat < 1:880967/250‑1 (MQ=255)ccGAAGCACAAGCCGCCGTCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGtgat < 1:620/250‑1 (MQ=255)ccGAAGCACAAGCCGCCGTCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGtgat < 1:717774/250‑1 (MQ=255) ccgTCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCTCAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATg < 1:408870/240‑1 (MQ=255) tCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCGATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGtt < 1:711701/251‑1 (MQ=255) aGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACa > 1:53503/1‑251 (MQ=255) cAGTCAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGtgattgat < 1:860352/219‑1 (MQ=255) gTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTccc < 1:55856/237‑1 (MQ=255) gTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGcc < 1:16360/241‑1 (MQ=255) gTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGt > 1:478492/1‑251 (MQ=255) gAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGt < 1:657591/247‑1 (MQ=255) gAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCAt > 1:536385/1‑251 (MQ=255) cAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGGGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGc < 1:440647/251‑1 (MQ=255) aaGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGcc < 1:543598/251‑1 (MQ=255) cAATCGCAAAATACCGATATGCTGATTAAAGCGCGGAAAGACGGACGGGTGAAATATCAAATTGCGGAAGTAGGAAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATaa < 1:10491/251‑1 (MQ=255) aTACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAAcg > 1:411341/1‑243 (MQ=255) ccGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGtt > 1:276710/1‑226 (MQ=255) ccGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCAc > 1:788132/1‑250 (MQ=255) atGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCaa > 1:29135/1‑251 (MQ=255) cTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATc < 1:791004/251‑1 (MQ=255) ggTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCATTTTCCCCGCCAACAtt > 1:422961/1‑187 (MQ=255) ggTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCATTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCa > 1:429959/1‑251 (MQ=255) gAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGtgattgat < 1:653405/153‑1 (MQ=255) atatCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATc > 1:476745/1‑219 (MQ=255) ttGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAAt > 1:516012/1‑240 (MQ=255) cGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGTTCAGTTTGCTCGATCCGACGGATTCCTATAGCAATGTTTTCCTCACTGCGCCACAAATGAATCATCTAAAATTGGGGGGTGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAATCCACGGAAGAACGCGCCAAATTGATGTTTAAGGt < 1:821054/250‑1 (MQ=255) gAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGt < 1:722288/172‑1 (MQ=255) gAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGaa > 1:604790/1‑251 (MQ=255) gTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAAtt > 1:352057/1‑251 (MQ=255) gCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATc > 1:402703/1‑199 (MQ=255) aTGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGcc < 1:205882/170‑1 (MQ=255) aTGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTc < 1:827041/185‑1 (MQ=255) gTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGcc < 1:672236/168‑1 (MQ=255) tctcGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCAc < 1:102821/204‑1 (MQ=255) tctcGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCg > 1:222056/1‑251 (MQ=255) tGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGat < 1:635011/250‑1 (MQ=255) tGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGat < 1:87666/250‑1 (MQ=255) ggTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATg < 1:299379/216‑1 (MQ=255) gTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCa > 1:740940/1‑251 (MQ=255) gTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCa > 1:725717/1‑251 (MQ=255) tGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCAc < 1:445649/251‑1 (MQ=255) gCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGAGGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCGATTCACCCCCAAATCCGTGGAAGCCACGgaagaa < 1:760328/197‑1 (MQ=255) aaGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGaaa < 1:125900/251‑1 (MQ=255) aaGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGaaa < 1:757057/251‑1 (MQ=255) cAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAAt > 1:758325/1‑215 (MQ=255) tttGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGc < 1:313737/248‑1 (MQ=255) tttGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGAAATTGCACTGAAATATAAGCt < 1:189087/249‑1 (MQ=255) cTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTttatt < 1:578668/251‑1 (MQ=255) aTCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTGAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTttatt < 1:512818/247‑1 (MQ=255) aTCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTaaaa > 1:19001/1‑251 (MQ=255) tACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAgg < 1:39883/243‑1 (MQ=255) tACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGa > 1:275403/1‑251 (MQ=255) aCCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGt < 1:475161/112‑1 (MQ=255) aCCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGa > 1:287417/1‑250 (MQ=255) ccTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGt > 1:397239/1‑111 (MQ=255) ccTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAAtt > 1:180183/1‑175 (MQ=255) ccTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCAc < 1:699796/216‑1 (MQ=255) ccTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACg > 1:278196/1‑251 (MQ=255) ccTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACg > 1:176213/1‑251 (MQ=255) atatCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCt < 1:284178/226‑1 (MQ=255) tatCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAgg < 1:596651/182‑1 (MQ=255) tatCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGgggc < 1:810688/251‑1 (MQ=255) tatCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGgggc < 1:39532/251‑1 (MQ=255) aTGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGgggctgggc < 1:681961/251‑1 (MQ=255) ttttCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGATGGGGCTGGGCTa < 1:666385/250‑1 (MQ=255) tttCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATc < 1:454946/132‑1 (MQ=255) tttCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGgggc > 1:314474/1‑242 (MQ=255) ttCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTAtgt < 1:92576/251‑1 (MQ=255) cTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATAc < 1:592622/251‑1 (MQ=255) gAATCAACTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGat < 1:864872/175‑1 (MQ=255) aaCTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATg > 1:376840/1‑209 (MQ=255) aaCTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATGACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGAGCTATGTGAAATAc < 1:184641/233‑1 (MQ=255) aCTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGc > 1:247442/1‑78 (MQ=255) aCTAAAATTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATGTTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATgg > 1:445105/1‑250 (MQ=255) aaaTTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGc < 1:891558/251‑1 (MQ=255) aTTGGGGGATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGcac < 1:290402/251‑1 (MQ=255) gggggATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGCACAGt > 1:370907/1‑251 (MQ=255) gATGAGGCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCAc < 1:47336/163‑1 (MQ=255) ggCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTttatt < 1:684288/177‑1 (MQ=255) ggCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAAt > 1:874624/1‑212 (MQ=255) ggCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGcac > 1:337317/1‑239 (MQ=255) gCCCGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGCACAGTTAAACGTg < 1:878228/249‑1 (MQ=255) cccGCATCGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGcac < 1:412217/237‑1 (MQ=255) | CCGAAGCACAAGCCGCCGTCGCACAGGCGCAAGCGCAGTTAGAACAAGCGCAATCGCAAAATACCGATATGCTGATTAAAGCGCCGAAAGACGGACGGGTGGAATATCAAATTGCGGAAGTAGGCAATGTTCTCGGTGCCGGTGGCAAAGTGGTCAGTTTGCTCGATCCGACGGATACCTATATCAATGTTTTCCTCACTGCGCCACAAATGAATCAACTAAAATTGGGGGATGAGGCCCGCATAGTGATTGATGGCATGGATGCCGTTTTCCCCGCCAACATTACGTTCATCGCCAATAACGCGCAATTCACCCCCAAATCCGTGGAAACCACGGAAGAACGCGCCAAATTGATGTTTAAGGTGAAATTGCAGCTTCCCGTGGATATTGCACTGAAATATAAGCTTTTATTAAAAGGCGGCATGACGGGGCTGGGCTATGTGAAATACGATCAGCAGGCGCAATGGCCGGCACAGTTAAACGTG > 1/1466685‑1467169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |