| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 34,390 | C→T | E200K (GAA→AAA) | unknown ← | Cytochrome c‑type heme lyase subunit nrfE, nitrite reductase complex assembly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 34,390 | 0 | C | T | 98.8% | 244.7 / NA | 85 | E200K (GAA→AAA) | unknown | Cytochrome c‑type heme lyase subunit nrfE, nitrite reductase complex assembly |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (44/40); total (45/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAAGGAAAATAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTCCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGACTTTGCGCCACAAAAGT > 1/34148‑34630 | caaGGAAAATAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATg > 1:104395/1‑249 (MQ=255) aaGGAAAATAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATg > 1:292209/1‑248 (MQ=255) aaaTAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGaa > 1:625371/1‑251 (MQ=255) aaaTAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGaa > 1:678862/1‑251 (MQ=255) aaaTAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGaa > 1:785711/1‑251 (MQ=255) aaTAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATg > 1:89141/1‑242 (MQ=255) gtcgtcCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAg < 1:185566/249‑1 (MQ=255) tcgtcCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGc < 1:137719/250‑1 (MQ=255) cgtcCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCgg > 1:257669/1‑251 (MQ=255) tAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATAc < 1:478869/250‑1 (MQ=255) tAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATAc < 1:758941/250‑1 (MQ=255) tAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATAc < 1:233241/250‑1 (MQ=255) cgcgTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTc < 1:282260/251‑1 (MQ=255) cTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGc < 1:222709/250‑1 (MQ=255) cGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATAc < 1:604243/222‑1 (MQ=255) cGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATAc > 1:35980/1‑222 (MQ=255) cGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACg > 1:179764/1‑251 (MQ=255) cGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCAAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTAAGAAATCTGGCGTTCAAAATGCTGATGAAGCAAGGCGGAAATACTGATGGAAAAATTCACTGAAAAGCCCACg > 1:91313/1‑251 (MQ=255) aTTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTa > 1:233507/1‑251 (MQ=255) aTTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTa < 1:94346/251‑1 (MQ=255) aaaCTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAAc > 1:394899/1‑250 (MQ=255) gtgCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTa < 1:477885/243‑1 (MQ=255) gtgCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAggg > 1:24557/1‑250 (MQ=255) tgCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGt < 1:262310/250‑1 (MQ=255) aacaaTGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAg < 1:767853/251‑1 (MQ=255) acaaTGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGc < 1:551872/251‑1 (MQ=255) acaaTGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGc < 1:787767/251‑1 (MQ=255) caaTGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCa > 1:701381/1‑251 (MQ=255) aTGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGACGGCAAAATTCACTGc < 1:89808/223‑1 (MQ=255) aCCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGaaaaaa > 1:590808/1‑249 (MQ=255) ccACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCg < 1:618944/223‑1 (MQ=255) cGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACaaa > 1:71518/1‑250 (MQ=255) ggCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTg > 1:19677/1‑186 (MQ=255) ttttCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACAt < 1:726066/251‑1 (MQ=255) ttttCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAAACGACATCCTGCAACAt > 1:61997/1‑251 (MQ=255) tCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGcc < 1:263586/182‑1 (MQ=255) tCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAAt > 1:131553/1‑250 (MQ=255) tCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAAACGACATCCTGCAACATCGGATTCaaaa > 1:66040/1‑249 (MQ=255) tCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAAACGACATCCTGCAACAt > 1:206248/1‑239 (MQ=255) tCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACAAACCGACATCCTGCAACAACGGATTCAAAt > 1:740728/1‑250 (MQ=255) tCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACAAAACGACATCCTGCAACATCGGAtt > 1:780069/1‑245 (MQ=255) cccAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATcc < 1:39060/251‑1 (MQ=255) aaCCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAAc < 1:897295/251‑1 (MQ=255) ccTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACgg < 1:331667/251‑1 (MQ=255) ccccAGCCCAGTTCGTAATACGCCCACCATGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGt < 1:107967/169‑1 (MQ=255) ccccAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCCCCCTTCCAActgtc > 1:853024/1‑246 (MQ=255) ccccAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACAAACCGACATCCTGCAACATCGGATTCAAAACCCGCCCTTCCAACGgcg > 1:115484/1‑250 (MQ=255) ccccAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGAGTAAAATCAAAACCACATCCTGCAACATCCGATTTAAATTCCCCCCTTCCaaacgcg > 1:739715/1‑245 (MQ=255) agTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAAACGACATCCTGCAACATCGGATTCAAATCCCGCCCCTCCAACCGCGCCCGGaaaaa > 1:66306/1‑250 (MQ=255) gTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTg > 1:784680/1‑131 (MQ=255) gTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAAACGACAACCTGCAACATCGGATTCAAATCCCCCCCCTCCAACGGCGCCGGGAAAAtt > 1:257306/1‑251 (MQ=255) gTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACAAAACGACATCCCGCAACATCGGATTCAAATCCCGCCCCTCCAACGGCGCCCGGAAAAATCGt > 1:234873/1‑250 (MQ=255) gTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACAAAACGAAAACCTGCAAAAACGGATTCAAAACCCCCCCTTCCCACGCCGCCGGGAAAATTCgc > 1:518714/1‑249 (MQ=255) aCGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAAc < 1:537520/251‑1 (MQ=255) aCGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAAATCGGCCGaa > 1:108666/1‑250 (MQ=255) caccaGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAACCGACATCCCGCAACATCGGATTCAAAACCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGAtt > 1:32233/1‑251 (MQ=255) gcgcCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAgaga < 1:836766/250‑1 (MQ=255) gcgcCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAgaga < 1:466565/250‑1 (MQ=255) gcgcCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAgaga < 1:779244/250‑1 (MQ=255) gcCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTc < 1:418220/196‑1 (MQ=255) cacaATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGGAAATTCGTCCGAACGGATTAGAGAAAAAGACGa > 1:689903/1‑251 (MQ=255) caATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAAt > 1:642524/1‑111 (MQ=255) aTGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAgaga < 1:593469/238‑1 (MQ=255) gCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCCACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAaca > 1:741535/1‑251 (MQ=255) aaaaaCAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACt < 1:93018/251‑1 (MQ=255) caacCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGc < 1:3196/251‑1 (MQ=255) ccATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCg > 1:605226/1‑112 (MQ=255) ccATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAACCGACATCCTGCAACAt > 1:143072/1‑159 (MQ=255) aTGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATc < 1:752188/251‑1 (MQ=255) aTGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATc < 1:251451/251‑1 (MQ=255) caccgacaccCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAGGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAAACGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCCACGGCGCCGGGAAAAATCGTCCGAACGGGTTAgaga > 1:727002/1‑212 (MQ=255) caccgacaccCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAAt < 1:132998/132‑1 (MQ=255) caccgacaccCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATTAAAACGACAACCTGCAACATCGGATTCAAATCCCGCCCTTCCCACGGCGCCGGGAAAATTCGTCCGAACGGATTAgaga > 1:62512/1‑212 (MQ=255) caccgacaccCAAGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAAACAAACCGACATCCTGCAACATCGGATTCAAAACCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAgaga > 1:73216/1‑212 (MQ=255) aaGCCCGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCAcc < 1:704717/251‑1 (MQ=255) ccGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGAc < 1:651820/251‑1 (MQ=255) ccGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGAc < 1:568868/251‑1 (MQ=255) cGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGc > 1:566329/1‑99 (MQ=255) cGCATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAG‑CGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGAc < 1:857467/249‑1 (MQ=255) cATGATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTTAAATCCCGCCCCTCCAACGGCGCCGGGAAAATTCGCCCGAACGGATTTGAGAAAAAGACGATAAACAAGGCGAAACTAAAGCAAATACGCCCCCAAATCACCAGAc > 1:801709/1‑248 (MQ=255) gATTTGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAAc < 1:266576/157‑1 (MQ=255) tttGAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGACTTTGCGcc < 1:229208/251‑1 (MQ=255) gAGCAATCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATTAAACCGACATcc > 1:525744/1‑119 (MQ=255) aaTCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGACTTTGCGCCACAAAAg < 1:698933/251‑1 (MQ=255) aTCTGGCGTTTCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGGGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAAACAGCCCCAAAATCACCAGACTTTTCGCCACAAAAga > 1:521398/1‑250 (MQ=255) | CAAGGAAAATAAGGTCGTCCAGTAATTAAAAATTCCGCGTTTTTCGCTGACGATTAAACTGTGCAACAATGCCAAGCCGAGCAACCACGGCATGAGCGACGCATTTTCCACCGGATCCCAGAACCACCAACCTCCCCAGCCCAGTTCGTAATACGCCCACCAGGCGCCAAGCACAATGCCCAAAGTTAAAAACAACCATGACACCGACACCCAAGCCCGCATGATTTGAGCAATCTGGCGTTCCAAATGCTGATGAAGCAAGGCGGTAATACTGATGGCAAAATTCACTGCAAAGCCCACGTAACCGAGGTAAAGCAACGGCGGGTGAAAAATCAAACCGACATCCTGCAACATCGGATTCAAATCCCGCCCTTCCAACGGCGCCGGGAAAATTCGTCCGAACGGATTAGAGAAAAAGACGATAAACACGGCGAAACTAAAGCAAATCAGCCCCAAAATCACCAGACTTTGCGCCACAAAAGT > 1/34148‑34630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |