| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,446,489 | T→C | intergenic (+46/‑30) | unknown → / → unknown | Chromosome partition protein MukB/Integral membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,446,489 | 0 | T | C | 100.0% | 193.7 / NA | 67 | intergenic (+46/‑30) | unknown/unknown | Chromosome partition protein MukB/Integral membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (32/35); total (32/35) | |||||||||||
CGGCGCGTTTGGATGCCAAATCTATTTCCACTTTATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCACAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACTGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACGGATTTCATCGCACAAAGTGAAAATATGCCGATTTTCTTG > 1/1446250‑1446728 | cggcgCGTTTGGATGCCAAATCTATTTCCACTTTATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTAtt < 1:243823/250‑1 (MQ=255)cggcgCGTTTGGATGCCAAATCTATTTCCACTTTATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTAt < 1:69318/249‑1 (MQ=255) cgTTTGGATGCCAAATCTATTTCCACTTTATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTa > 1:871638/1‑251 (MQ=255) aTCTATTTCCACTTTATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATaaaaaa > 1:745798/1‑251 (MQ=255) ttATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCAt < 1:659203/251‑1 (MQ=255) tATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCAtt > 1:8671/1‑251 (MQ=255) aTTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTa < 1:381482/251‑1 (MQ=255) aTTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTa < 1:688888/251‑1 (MQ=255) tCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATc < 1:168567/251‑1 (MQ=255) gAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCGCAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCg > 1:80887/1‑250 (MQ=255) gtgCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTc > 1:415923/1‑250 (MQ=255) gCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATaaaa > 1:97756/1‑223 (MQ=255) aaCGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgt < 1:652973/251‑1 (MQ=255) gCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtagcg > 1:795216/1‑251 (MQ=255) cTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTCCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtagcgt < 1:454742/251‑1 (MQ=255) tAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtagcgta > 1:401901/1‑251 (MQ=255) gATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTcc < 1:296070/238‑1 (MQ=255) gATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtagcgtag > 1:5156/1‑250 (MQ=255) atatGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGtagcgtagcg > 1:767528/1‑251 (MQ=255) atatGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGtagcgtagcg > 1:599488/1‑251 (MQ=255) tatGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCgg < 1:410074/251‑1 (MQ=255) atGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGt > 1:395178/1‑251 (MQ=255) tGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTa < 1:144318/251‑1 (MQ=255) gCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTa > 1:381500/1‑250 (MQ=255) gCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTa > 1:651633/1‑250 (MQ=255) atCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCg < 1:494542/251‑1 (MQ=255) cccGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAGCAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGGCCGCAAGCGTaa < 1:40455/249‑1 (MQ=255) ccGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAatat < 1:109371/251‑1 (MQ=255) ccGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAatat < 1:174307/251‑1 (MQ=255) ccGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAatat < 1:340806/251‑1 (MQ=255) ggAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCg > 1:7986/1‑251 (MQ=255) gAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtag > 1:304706/1‑203 (MQ=255) aaaaaGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGt < 1:33211/250‑1 (MQ=255) acaACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAgg < 1:440980/154‑1 (MQ=255) ccTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAatat > 1:901548/1‑235 (MQ=255) ccTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCt < 1:522645/251‑1 (MQ=255) cTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTa > 1:483231/1‑251 (MQ=255) aCAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTAtt > 1:607689/1‑251 (MQ=255) ggTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGaaa < 1:889035/205‑1 (MQ=255) tGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAAc < 1:419846/251‑1 (MQ=255) aaaaTTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATAc < 1:100275/251‑1 (MQ=255) aaaaTTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATAc < 1:475892/251‑1 (MQ=255) cGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGt < 1:162867/251‑1 (MQ=255) cGTTCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGt > 1:36029/1‑251 (MQ=255) ttCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtag < 1:171324/148‑1 (MQ=255) ttCATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGttt > 1:485150/1‑251 (MQ=255) cATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtag < 1:784458/146‑1 (MQ=255) cATGTAGTCGGCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATAc < 1:796881/224‑1 (MQ=255) ggCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCAt > 1:710239/1‑205 (MQ=255) gCTTACGCGGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCg > 1:635898/1‑251 (MQ=255) cgcgGATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGt > 1:667638/1‑158 (MQ=255) gATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGaa > 1:793881/1‑151 (MQ=255) gATTCGGCGCAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCaaa > 1:357305/1‑251 (MQ=255) acaGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCAt < 1:804751/69‑1 (MQ=255) acaGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTa > 1:663386/1‑166 (MQ=255) acaGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAAtt > 1:341264/1‑251 (MQ=255) gagTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATAc > 1:809600/1‑191 (MQ=255) tagtTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACgg < 1:762645/250‑1 (MQ=255) tagtTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACgg < 1:606425/250‑1 (MQ=255) gtTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCCCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACGGAtt > 1:637326/1‑251 (MQ=255) gTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTg > 1:288377/1‑192 (MQ=255) gAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGt < 1:472123/179‑1 (MQ=255) gTGCGGTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTgtagcgtag < 1:789000/97‑1 (MQ=255) gTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTa < 1:793026/71‑1 (MQ=255) gTTAAAAAATAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATAc < 1:501270/165‑1 (MQ=255) aaaaaaTAAAGTGTTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACGGATTTCATCGCACAAAGTGAAAATATGc < 1:573157/251‑1 (MQ=255) tgtTTTTTGACCGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACGGATTTCATCGCACAAAGTGAAAATATGCCGATTTTCtcg > 1:432160/1‑249 (MQ=255) | CGGCGCGTTTGGATGCCAAATCTATTTCCACTTTATTCGAGCTGTGCGAACGGCTAGATATGCAATTGCTCATCGCCGCCCCGGAAAATATCAGCCCGGAAAAAGGCACAACCTACAAACTGGTGCGGAAAATTTCCGGTAATCACGAACACGTTCATGTAGTCGGCTTACGCGGATTCGGCACAACAGAGTAGTTTGTAAAAGAAAAAGTGCGGTTAAAAAATAAAGTGTTTTTTGACTGCACTTTATTTCATTAAAAGGAATAAAAAATGCACAATCTCATTATCGCCGTCCTCTGTAGCGTAGCGGTTTCCGTACTATTGAAAGTTGCCCGCAAGCGTAATATCGTTATTCAACAAGCTATTGCATTTAACTATACTGTTGCGTTGTCACTTTCTTGGTTTTTGTTAAAACCGGATTTCAAAGGGCTTGAATTTACGGATTTCATCGCACAAAGTGAAAATATGCCGATTTTCTTG > 1/1446250‑1446728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |