| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,408,998 | A→C | A68A (GCA→GCC) | unknown → | Pseudouridine synthase (EC 4.2.1.70), VC1668 type |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,408,998 | 0 | A | C | 100.0% | 164.7 / NA | 57 | A68A (GCA→GCC) | unknown | Pseudouridine synthase (EC 4.2.1.70), VC1668 type |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (28/29); total (28/29) | |||||||||||
GTATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCAGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAACCGACAAAACCCATCAGCTC > 1/1408753‑1409241 | gtATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGa > 1:388793/1‑250 (MQ=255) tATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACg < 1:793117/251‑1 (MQ=255) ggttctgctttacatgatcttgttCTCCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAg > 1:299325/23‑250 (MQ=255) gATTTTCTCCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAAtt > 1:222464/1‑250 (MQ=255) ctcCATGACGTTTCAAATTGTACTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAg > 1:776852/1‑226 (MQ=255) tcCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAAc < 1:838173/251‑1 (MQ=255) gTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCt < 1:206499/239‑1 (MQ=255) aCAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATc < 1:744313/251‑1 (MQ=255) gAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCAc < 1:143880/206‑1 (MQ=255) aCGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCA‑CGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGata < 1:162711/251‑1 (MQ=255) cGGTATCAGCGTACACAAAGACGATGCCGGCATCGGTTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCTGATTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGAGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAGGaa < 1:869373/225‑1 (MQ=255) gTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAAt < 1:183970/238‑1 (MQ=255) gTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATg > 1:467919/1‑251 (MQ=255) gTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATg > 1:391302/1‑251 (MQ=255) gTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATg > 1:787115/1‑251 (MQ=255) gTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGGGATATg > 1:598606/1‑251 (MQ=255) cAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCaaa > 1:832897/1‑251 (MQ=255) cacaAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAgcgcg > 1:272409/1‑251 (MQ=255) cacaAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAgcgcg > 1:666593/1‑251 (MQ=255) cGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGa < 1:193893/251‑1 (MQ=255) cATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAAc < 1:654692/251‑1 (MQ=255) aTCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAAcg < 1:170240/251‑2 (MQ=255) cGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGa < 1:622489/251‑1 (MQ=255) ggCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCaa > 1:86722/1‑222 (MQ=255) ggCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGa > 1:389970/1‑250 (MQ=255) ggCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGAGCTTGGAAACTGa > 1:901806/1‑250 (MQ=255) cTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGAcc < 1:701688/250‑1 (MQ=255) aaCCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCcaaa > 1:611783/1‑251 (MQ=255) cccGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAAGGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCcaaagc < 1:434232/251‑1 (MQ=255) gACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACg < 1:872712/110‑1 (MQ=255) aCAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATACAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCg > 1:264110/1‑251 (MQ=255) ccGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAAc < 1:377387/211‑1 (MQ=255) cGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTtgtg < 1:345946/251‑1 (MQ=255) cAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTgtgt < 1:188303/250‑1 (MQ=255) tttGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCAt < 1:463963/251‑1 (MQ=255) ggTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCg > 1:886653/1‑251 (MQ=255) tCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCAc < 1:397366/251‑1 (MQ=255) ggATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTg > 1:610557/1‑250 (MQ=255) aTAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTgcgc < 1:70784/251‑1 (MQ=255) aaaGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCAc > 1:538789/1‑238 (MQ=255) cTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTc < 1:466888/251‑1 (MQ=255) cGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTg < 1:718292/251‑1 (MQ=255) gggTTATTAATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAAtt > 1:720596/1‑232 (MQ=255) ttattaATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGc < 1:518461/139‑1 (MQ=255) ttattaATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAgg < 1:20452/155‑1 (MQ=255) ttattaATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAAc > 1:832837/1‑250 (MQ=255) attaATGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCa > 1:540357/1‑125 (MQ=255) tGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAAc > 1:330863/1‑250 (MQ=255) tGTTAGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAAc > 1:803892/1‑250 (MQ=255) aGCATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAAc > 1:30242/1‑155 (MQ=255) cATTAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAACCGACaaa > 1:552416/1‑251 (MQ=255) tAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGata < 1:129766/120‑1 (MQ=255) tAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCg > 1:198196/1‑236 (MQ=255) tAAATGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAACCGACAAAAc > 1:80352/1‑250 (MQ=255) aaaTGAACAGGCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAAt < 1:594757/108‑1 (MQ=255) gCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAACCGACAAAACCCATCAGc < 1:445220/247‑1 (MQ=255) gCTGCCGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAACCGACAAAACCCATCAGCTc < 1:618997/249‑1 (MQ=255) | GTATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGTATTTCAACATCCTGATTTTATCGTGATTAACAAACCGAACGGTATCAGCGTACACAAAGACGATGCCGACATCGGCTTAACCCGACTGGTGGCGCAACAGCTTGGCGTGCCGCAGGTTTGGCTGGTTCATCGGCTGGATAAAGTGACCTCGGGGTTATTAATGTTAGCATTAAATGAACAGGCTGCAGTGACGTTGTCACAAAAGTTTGCATATCATCAAATTCAGAAAACTTACCTCGCACTGGCAGCTCACAAACCAAAGAAAAAGCAGGGGAGAATCAGCGGTGATATGCAAAAAGCGCGCCGAGGTGCTTGGAAACTGACCCAAAGCAAAGAAAATCCTGCCGTGACAGATTTTGTGTCCCATAGTCTCGCACCAAATTTGCGCTTATTTATTCTGCAACCGAAAACCGACAAAACCCATCAGCTC > 1/1408753‑1409241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |