| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,358,340 | C→T | T324I (ACC→ATC) | unknown → | Signal peptide peptidase SppA (protease 4) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,358,340 | 0 | C | T | 100.0% | 233.2 / NA | 80 | T324I (ACC→ATC) | unknown | Signal peptide peptidase SppA (protease 4) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (43/37); total (43/37) | |||||||||||
CATCAAAGAAGAGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACACCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGTTTCCATG > 1/1358104‑1358578 | cATCAAAGAAGAGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTg > 1:69890/1‑251 (MQ=255) tCAAAGAAGAGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTg > 1:2921/1‑249 (MQ=255) tCAAAGAAGAGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTg > 1:673089/1‑249 (MQ=255) cAAAGAAGAGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTg < 1:874235/251‑1 (MQ=255) aagaGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAg < 1:27818/249‑1 (MQ=255) aagaGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTg < 1:618217/251‑1 (MQ=255) ttGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGa < 1:642648/250‑1 (MQ=255) tGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGGCCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGa < 1:530762/240‑1 (MQ=255) cacCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATg > 1:465017/1‑251 (MQ=255) ccTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATgg > 1:48115/1‑250 (MQ=255) ccTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATgg > 1:345598/1‑250 (MQ=255) ccTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATgg > 1:474655/1‑250 (MQ=255) cTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCg > 1:847925/1‑251 (MQ=255) aTTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGaa > 1:78420/1‑251 (MQ=255) aTTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAAc > 1:38580/1‑214 (MQ=255) aTTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATgaag > 1:813054/1‑251 (MQ=255) ggCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGa > 1:589062/1‑251 (MQ=255) cATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAgggg > 1:769640/1‑203 (MQ=255) cATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGac < 1:111036/247‑1 (MQ=255) aCGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCg < 1:186630/250‑1 (MQ=255) aCGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGc < 1:623995/251‑1 (MQ=255) cGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCa > 1:23458/1‑251 (MQ=255) gCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTtggtgg < 1:596205/236‑1 (MQ=255) aTGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTg > 1:628176/1‑251 (MQ=255) aTGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTg > 1:43606/1‑251 (MQ=255) aTGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTg > 1:397370/1‑251 (MQ=255) aacaacGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCGCTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGc < 1:573368/251‑1 (MQ=255) cGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGaa < 1:574604/177‑1 (MQ=255) cGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGc < 1:195521/251‑1 (MQ=255) gTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatg > 1:77729/1‑251 (MQ=255) ttGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatga < 1:57816/251‑1 (MQ=255) tGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatgat < 1:248051/251‑1 (MQ=255) gATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAgg > 1:644359/1‑171 (MQ=255) gATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACCTGtctcttatacacattctc > 1:823792/1‑233 (MQ=255) gCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGa > 1:801842/1‑250 (MQ=255) gCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGACCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGa > 1:583857/1‑250 (MQ=255) cGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACg < 1:783233/251‑1 (MQ=255) gTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGacac < 1:329161/209‑1 (MQ=255) gTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatgat < 1:96761/240‑1 (MQ=255) gTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAg > 1:513512/1‑246 (MQ=255) gTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGt > 1:386718/1‑251 (MQ=255) ggACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatga < 1:236361/234‑1 (MQ=255) aCCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGc < 1:98561/250‑1 (MQ=255) aCCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGc < 1:236161/250‑1 (MQ=255) gCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGa < 1:478903/238‑1 (MQ=255) tAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTc < 1:326063/251‑1 (MQ=255) gATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAgggg > 1:854049/1‑142 (MQ=255) gATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCg > 1:618919/1‑241 (MQ=255) gATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGt > 1:293425/1‑251 (MQ=255) gATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGt > 1:703655/1‑251 (MQ=255) gAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAg > 1:460030/1‑94 (MQ=255) aCCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGa < 1:704812/93‑1 (MQ=255) aaTGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGc < 1:100954/186‑1 (MQ=255) aGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTc < 1:195571/188‑1 (MQ=255) gATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCtt > 1:558006/1‑217 (MQ=255) gATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCa > 1:817512/1‑251 (MQ=255) ttACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAg > 1:899433/1‑166 (MQ=255) tACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGCCACtt < 1:636585/251‑1 (MQ=255) acacTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACtt > 1:500395/1‑136 (MQ=255) acacTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTgcgc > 1:703195/1‑185 (MQ=255) acacTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGcc < 1:38094/195‑1 (MQ=255) cacTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTacaac < 1:659774/251‑1 (MQ=255) tACCTGGCTTCTTTGCCGGGTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGc > 1:164814/1‑143 (MQ=255) tACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGc < 1:232186/203‑1 (MQ=255) tACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGc < 1:331887/251‑1 (MQ=255) ccTGGCTTCTTTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGc < 1:425108/141‑1 (MQ=255) ttcttTGCCGGATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAAc < 1:876389/251‑1 (MQ=255) ggATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatga < 1:169500/132‑1 (MQ=255) ggATCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCggtggtgg > 1:460166/1‑251 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCAt > 1:895715/1‑61 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTatgat > 1:277386/1‑131 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATgatgat < 1:834371/134‑1 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGt < 1:615194/218‑1 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTacaac > 1:505474/1‑228 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGtt > 1:765553/1‑251 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGtt > 1:346452/1‑251 (MQ=255) aTCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGtt > 1:708895/1‑251 (MQ=255) tCGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGCAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTacaac > 1:676948/1‑227 (MQ=255) cGTATGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGTTTc < 1:301096/251‑1 (MQ=255) tGTCGGGCGACATCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGTTTCCATg < 1:158465/251‑1 (MQ=255) | CATCAAAGAAGAGGCTGTTGCACCGAATGCGCACACCTATTTAACCGAATTAAAAGCCTTGCAAGGCGACATGACGGCTTATGTGAAACAACGTAAGTTGATTAACGGCGTATTGGACCGCTTTAATTTAGATAAAAAACTGACCGCACTTTTCGGTGATAATGAAGATAAGCAACCGAAAATGGTAGATTACGACACTTACCTGGCTTCTTTGCCGGATCGTATGTCGGGCGACACCAAGAATAAAATTGCTGTAGTGAACGTGGAAGGGGCGATCATTGATGGCGAAACCGATGAAGAAAACGTTGGTGGCGACACTATCGCAAACTTGTTACGCAAGGCTTATGATGATAAGGACGTGAAAGCTGTCGTTCTGCGCGTTAACAGCCCGGGCGGTAGTGCTTTTGCATCGGAAATCATTCGTCAGGAGCTCAGTCACTTACAACAAGCAGGCAAACCGGTGGTGGTTTCCATG > 1/1358104‑1358578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |