| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,332,897 | A→G | intergenic (‑77/‑350) | unknown ← / → unknown | DNA internalization‑related competence protein ComEC/Rec2/RNA polymerase‑binding transcription factor DksA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,332,897 | 0 | A | G | 100.0% | 254.8 / NA | 84 | intergenic (‑77/‑350) | unknown/unknown | DNA internalization‑related competence protein ComEC/Rec2/RNA polymerase‑binding transcription factor DksA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/45); total (39/45) | |||||||||||
CCTTGACGGTAAATTCGCGGTGAACGGTTTTCGGCAGATTGGCAAGATTATCCGCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATATTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACGCCTTCAAAATTTGGG > 1/1332649‑1333142 | ccTTGACGGTAAATTCGCGGTGAACGGTTTTCGGCAGATTGGCAAGATTATCCGCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGT‑AGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTa < 1:669515/251‑1 (MQ=255) aCGGTAAATTCGCGGTGAACGGTTTTCGGCAGATTGGCAAGATTATCCGCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAAc < 1:671550/250‑1 (MQ=255) gTTTTCGGCAGATTGGCAAGATTATCCGCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAg > 1:304490/1‑250 (MQ=255) gCAGATTGGCAAGATTATCCGCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGACGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACtt < 1:92171/250‑1 (MQ=255) gCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATc > 1:557194/1‑213 (MQ=255) ccTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACAttt < 1:399935/251‑1 (MQ=255) tCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAAc < 1:707949/250‑1 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATcc < 1:219738/224‑1 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAATGAAACGCTCACATTTTCAACCGCa > 1:517630/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:57601/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:712/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:808048/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:727608/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:319478/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:160102/1‑251 (MQ=255) gTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCAGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCa > 1:423145/1‑251 (MQ=255) ggAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACttt > 1:403950/1‑251 (MQ=255) aaTTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTtct < 1:500077/251‑1 (MQ=255) gtggACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAggg > 1:400737/1‑250 (MQ=255) tAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGc < 1:710857/182‑1 (MQ=255) tAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACAttt < 1:588370/216‑1 (MQ=255) tAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGctac < 1:893206/250‑1 (MQ=255) tAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGcta > 1:119617/1‑249 (MQ=255) cGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATgg < 1:215478/251‑1 (MQ=255) aCTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGgaag < 1:580435/251‑1 (MQ=255) gAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTcaca < 1:82712/203‑1 (MQ=255) atcaAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAAc < 1:149661/151‑1 (MQ=255) atcaAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATggg > 1:393482/1‑250 (MQ=255) atcaAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATg < 1:492683/248‑1 (MQ=255) gATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAAc > 1:759138/1‑146 (MQ=255) gATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGga < 1:293012/236‑1 (MQ=255) ccACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAggg < 1:850865/214‑1 (MQ=255) ccACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAAc < 1:318075/249‑1 (MQ=255) cTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAgg > 1:160621/1‑250 (MQ=255) ttGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACAt < 1:681655/173‑1 (MQ=255) gCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACGTTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAatat > 1:425444/1‑251 (MQ=255) tGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTgg < 1:322754/251‑1 (MQ=255) aTTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAAc < 1:528930/173‑1 (MQ=255) aTTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGTCGGGGTGTAAAACCGACGGAAGTGAATATTGGaa > 1:349538/1‑251 (MQ=255) aTTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGaa > 1:642804/1‑251 (MQ=255) gTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGc > 1:415097/1‑213 (MQ=255) ccTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAAt < 1:300072/251‑1 (MQ=255) gTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGgaagaa < 1:194697/202‑1 (MQ=255) gggCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAAc < 1:84298/214‑1 (MQ=255) gggCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAAc < 1:865614/237‑1 (MQ=255) gCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGAAAATAGCACGCCGTCTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAggg > 1:575509/1‑177 (MQ=255) caagcaaCATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGACGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAAttttt > 1:441959/1‑251 (MQ=255) caaCATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTtcat > 1:780373/1‑250 (MQ=255) cATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAAc > 1:577900/1‑86 (MQ=255) cATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAAc > 1:86138/1‑198 (MQ=255) tGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAAc < 1:842774/196‑1 (MQ=255) cATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGgaag > 1:547902/1‑168 (MQ=255) cATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAAc > 1:351090/1‑188 (MQ=255) ataataAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAGTGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAg > 1:444800/1‑251 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAatat > 1:92904/1‑202 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCaaaaa > 1:669785/1‑241 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGa < 1:367349/251‑1 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGa < 1:691419/251‑1 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGa > 1:540823/1‑251 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGa < 1:514418/251‑1 (MQ=255) taataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAA‑TTTTCATCAAAAAAGCTAATAGAt > 1:450480/1‑251 (MQ=255) aataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGaa < 1:290706/206‑1 (MQ=255) aataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGa > 1:137192/1‑250 (MQ=255) ataaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGAtg < 1:377986/251‑1 (MQ=255) taaGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTgg > 1:18900/1‑202 (MQ=255) ggagTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAAc < 1:39418/178‑1 (MQ=255) gagTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAAt > 1:844028/1‑251 (MQ=255) agTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAAc < 1:505044/119‑1 (MQ=255) gTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAAttt > 1:170171/1‑251 (MQ=255) aaaTAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAAc < 1:96992/61‑1 (MQ=255) aaaTAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGa < 1:152361/238‑1 (MQ=255) aaaTAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGAtg > 1:422256/1‑240 (MQ=255) aaaTAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTa > 1:602606/1‑251 (MQ=255) aCGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATa < 1:504873/251‑1 (MQ=255) tGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAg < 1:823233/248‑1 (MQ=255) aataaAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTgg < 1:857336/168‑1 (MQ=255) taaAAAGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTa < 1:481512/251‑1 (MQ=255) aaaaGCGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTAtt < 1:183080/251‑1 (MQ=255) cGATCGGGCGAAAACAATAATGTTAAACCGCGAAAAATCAGGGCTATAGCCAGCTTATCCAACGAAACGCTGACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTGTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTtat < 1:329860/249‑1 (MQ=255) cGATCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTtata < 1:532850/250‑1 (MQ=255) aTCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACg < 1:873301/250‑1 (MQ=255) aTCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACGc < 1:849991/251‑1 (MQ=255) aTCGGGCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACGc < 1:244692/251‑1 (MQ=255) ggCAAAAACAATAATGTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACGCCtt > 1:647881/1‑250 (MQ=255) ataatgTTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACGCCTTCAAAATTTggg < 1:357865/251‑1 (MQ=255) | CCTTGACGGTAAATTCGCGGTGAACGGTTTTCGGCAGATTGGCAAGATTATCCGCCTGGGTCAGTATGGAAATTGCCGATTGGTGGACGTAAGCGGACTGAATCATCAAGATCAGTAGCCACATTACTATTTGCTTGATTTTGTCCTGTCGCAGGGCATAAGCAAGCAACATGAGTGGACATAATAAGAGGAGTAAATAGCACGCCGTTTGCCACGATAATAAAAAGCGATCGGGCAAAAACAATAATATTAAACCGCTAAAAATCAGGGCTATAGCCAACTTATCCAACGAAACGCTCACATTTTCAACCGCACTTTTCTCATCCGAAGGGCGGCTACTATGGAAGAAATGGGCGGGGTGTAAAACCGACGGAAGTGAATATTGGAAACTGAATCACAAAAATAAAATTTTTCATCAAAAAAGCTAATAGATGTGTAAATTTTATTTGATAAATAGGATAAGTTCTGCTATTTATACGCCTTCAAAATTTGGG > 1/1332649‑1333142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |