Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,310,650	G→A	T196I (ACA→ATA)	unknown ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,310,650	0	G	A	100.0%	135.7 / NA	48	T196I (ACA→ATA)	unknown	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (27/21);  total (27/21)

CTAATCTGCAGTTCTAATTCCCTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATGTAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAATAAACCATGAATTAA  >  1/1310405‑1310896                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       cTAATCTGCAGTTCTAATTCCCTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGc                                                                                                                                                                                                                                                    <  1:675566/250‑1 (MQ=255)  tAATCTGCAGTTCTAATTCCCTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCAt                                                                                                                                                                                                                                                  <  1:231165/251‑1 (MQ=255)           gTTCTAATTCCCTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGaaaa                                                                                                                                                                                                                                         >  1:711369/1‑251 (MQ=255)             tCTAATTCCCTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAAt                                                                                                                                                                                                                                        >  1:18626/1‑250 (MQ=255)                     ccTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGa                                                                                                                                                                                                                               <  1:274880/251‑1 (MQ=255)                            cTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTTATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCAt                                                                                                                                                                                                                                                  <  1:425209/225‑1 (MQ=255)                            cTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAacac                                                                                                                                                                                                                        <  1:800092/251‑1 (MQ=255)                                   gCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCAtttt                                                                                                                                                                                                                 >  1:428859/1‑251 (MQ=255)                                                          aGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAAttt                                                                                                                                                                                                 <  1:561132/244‑1 (MQ=255)                                                                  gTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGc                                                                                                                                                                                                                                                    <  1:892760/185‑1 (MQ=255)                                                                  gTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGaaa                                                                                                                                                                                                                             >  1:806850/1‑208 (MQ=255)                                                                   tcatcaTTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCtt                                                                                                                                                                                  <  1:289956/250‑1 (MQ=255)                                                                                  tCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGtttttt                                                                                                                                                                  <  1:38740/251‑1 (MQ=255)                                                                                    aTTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAg                                                                                                                                                                                                                                >  1:340030/1‑187 (MQ=255)                                                                                                           aaCGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGc                                                                                                                                         <  1:314452/251‑1 (MQ=255)                                                                                                             cGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTgg                                                                                                                                          >  1:619363/1‑248 (MQ=255)                                                                                                                 cAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGc                                                                                                                                                                                                                                                    >  1:789055/1‑138 (MQ=255)                                                                                                                 cAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGc                                                                                                                                                                                                                                                    >  1:224048/1‑138 (MQ=255)                                                                                                                 cAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTAt                                                                                                                                                                >  1:258243/1‑222 (MQ=255)                                                                                                                       aCATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGc                                                                                                                             <  1:615395/251‑1 (MQ=255)                                                                                                                                          aTTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAgg                                                                                                           <  1:623353/250‑1 (MQ=255)                                                                                                                                           ttttCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTACATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGtt                                                                                                         >  1:477449/1‑251 (MQ=255)                                                                                                                                                 atatTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAAc                                                                                                                                               >  1:737061/1‑207 (MQ=255)                                                                                                                                                 atatTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAAt                                                                                                                                  >  1:191242/1‑220 (MQ=255)                                                                                                                                                 atatTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTGGCGCCGCTTCTCCCGTTATCAAACGATATATTTATAGTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGAt                                                                                                                                                    >  1:403934/1‑202 (MQ=255)                                                                                                                                                    ttGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAAc                                                                                                                                               >  1:821160/1‑204 (MQ=255)                                                                                                                                                    ttGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAAt                                                                                                >  1:717470/1‑251 (MQ=255)                                                                                                                                                      gTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCt                                                                                                                        >  1:86463/1‑225 (MQ=255)                                                                                                                                                                   ccGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACaa                                                                                                                                                                                            <  1:582093/144‑1 (MQ=255)                                                                                                                                                                                          gtttgttCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGc                                                                                                                             >  1:822043/1‑184 (MQ=255)                                                                                                                                                                                                    ttGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGtgttttgttt                                                <  1:838742/251‑1 (MQ=255)                                                                                                                                                                                                            cTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGc                                                                                                                             >  1:357920/1‑166 (MQ=255)                                                                                                                                                                                                                             cTATAGATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAAc                                                                                                                                               <  1:291720/131‑1 (MQ=255)                                                                                                                                                                                                                                  gATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAAc                                                                                                                                               >  1:886871/1‑126 (MQ=255)                                                                                                                                                                                                                                  gATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCt                                                                                                                        >  1:100268/1‑149 (MQ=255)                                                                                                                                                                                                                                  gATTTATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGa                  >  1:303772/1‑251 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTttct                                                                           <  1:836167/192‑1 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGAt                            >  1:597364/1‑239 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAAt                >  1:896986/1‑251 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAAt                >  1:899342/1‑251 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAAt                <  1:498640/251‑1 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAAt                >  1:349725/1‑251 (MQ=255)                                                                                                                                                                                                                                    tttATATTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAAt                <  1:143457/251‑1 (MQ=255)                                                                                                                                                                                                                                         atTCTGCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAATAAAcc           <  1:710999/251‑1 (MQ=255)                                                                                                                                                                                                                                              gCTTGAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAAc                                                                                                                                               <  1:393811/114‑1 (MQ=255)                                                                                                                                                                                                                                                  gAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGaa                     <  1:334378/232‑1 (MQ=255)                                                                                                                                                                                                                                                  gAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAATAAACCATGAATTaa  >  1:813504/1‑251 (MQ=255)                                                                                                                                                                                                                                                  gAATATAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAATAAACCATGAATTaa  >  1:655523/1‑251 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       CTAATCTGCAGTTCTAATTCCCTTTCACTTGTAAGCCAATTTTCCAATCTGCAAAAAAGCGAGAAGTCATCATTTTCGCCGTCATTCAGGACAATTTCCGCCACATAACGATCAAATAACATTTCCACATTTTGCAGATTTTCAATATTGTAATAGCATTTGCCGTCAAATGTTCCATGAGCTCTGTTTGTTCCGTTGCGCCGCTTCTCCCGTTATCAAACTATAGATTTATATTCTGCTTGAATGTAGCATTTTGGAAAATCTCTACAGAAAAACACCCATTTTTTTGATGAAATAATTTTACAAACTCATTCTTTTTCAAATAGTTTTTTATTTCATGTTGGATAAAACCGTGGCTGACAATACAGCAATCTTGTTTTAGTAAGGTTGGCATTAATTTCTTAACGCGCTTTTTTTCTTCACCAATATTTTTTTGTGTTTTGTTTAGTCCCAGTAGCCATAAGATTCTGGAAAGAATAAACCATGAATTAA  >  1/1310405‑1310896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑