Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,290,262	C→T	E92K (GAA→AAA)	unknown ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,290,262	0	C	T	100.0%	142.6 / NA	48	E92K (GAA→AAA)	unknown	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (31/17);  total (31/17)

ATATTTTTTAATAAAGAAACTCTATTATGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTCATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAGAACACCCTGTCT  >  1/1290018‑1290505                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    atatTTTTTAATAAAGAAACTCTATTATGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCt                                                                                                                                                                                                                                               <  1:401517/251‑1 (MQ=255)            taaAGAAACTCTATTATGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGAt                                                                                                                                                                                                                                    >  1:246261/1‑251 (MQ=255)                      ctATTATGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTa                                                                                                                                                                                                                          >  1:485288/1‑251 (MQ=255)                           atGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGaa                                                                                                                                                                                                                      >  1:412970/1‑250 (MQ=255)                            tGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACt                                                                                                                                                                                                                    <  1:311039/251‑1 (MQ=255)                                      gCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGt                                                                                                                                                                                                           >  1:695330/1‑250 (MQ=255)                                                    ggTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGt                                                                                                                                                                                            >  1:703605/1‑251 (MQ=255)                                                        tataTCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAAt                                                                                                                                                                                        <  1:389414/251‑1 (MQ=255)                                                             ccGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAAcc                                                                                                                                                                                                                                          <  1:63061/196‑1 (MQ=255)                                                                      cGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTAt                                                                                                                                                                          >  1:418759/1‑251 (MQ=255)                                                                        aTAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATgg                                                                                                                                                                        >  1:686569/1‑251 (MQ=255)                                                                        aTAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATgg                                                                                                                                                                        >  1:288856/1‑251 (MQ=255)                                                                              gTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGaagaag                                                                                                                                                                  >  1:331192/1‑251 (MQ=255)                                                                                     tttAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACCCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCActc                                                                                                                                                           <  1:437178/251‑1 (MQ=255)                                                                                           ccAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGa                                                                                                                                                     <  1:296013/251‑1 (MQ=255)                                                                                              aGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAAt                                                                                                                                                                                        <  1:52585/213‑1 (MQ=255)                                                                                                           ctctATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTtgtaatgta                                                                                                                                     >  1:771235/1‑251 (MQ=255)                                                                                                           ctctATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTtgtaatgta                                                                                                                                     >  1:552346/1‑251 (MQ=255)                                                                                                             ctATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGgaag                                                                                                                                                                     >  1:419396/1‑217 (MQ=255)                                                                                                             ctATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTgtaatgtaat                                                                                                                                   >  1:719301/1‑251 (MQ=255)                                                                                                             ctATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTgtaatgtaat                                                                                                                                   >  1:680186/1‑251 (MQ=255)                                                                                                                          gcgctACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATca                                                                                                                      >  1:72039/1‑251 (MQ=255)                                                                                                                                  gTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATAc                                                                                                                                 >  1:673121/1‑232 (MQ=255)                                                                                                                                     ttGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGc                                                                                                           <  1:854569/251‑1 (MQ=255)                                                                                                                                                     aTTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTgtgt                                                                                            >  1:73283/1‑250 (MQ=255)                                                                                                                                                             gCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATcac                                                                                                                     <  1:477691/217‑1 (MQ=255)                                                                                                                                                                     cTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTtg                                                                                                                                                                                                <  1:29818/134‑1 (MQ=255)                                                                                                                                                                         aaTATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTtgtaatg                                                                                                                                       <  1:875441/187‑1 (MQ=255)                                                                                                                                                                                  aTACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATAccc                                                               >  1:598957/1‑250 (MQ=255)                                                                                                                                                                                                 ggATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTc                                                   >  1:37705/1‑247 (MQ=255)                                                                                                                                                                                                  gATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATAc                                                                                                                                 >  1:602177/1‑168 (MQ=255)                                                                                                                                                                                                      tGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTgg                                                                                                                                                                                             <  1:576343/104‑1 (MQ=255)                                                                                                                                                                                                       gCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGgaag                                                                                                                                                                     >  1:411549/1‑127 (MQ=255)                                                                                                                                                                                                       gCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGcc                                                        <  1:309081/236‑1 (MQ=255)                                                                                                                                                                                                            aTGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGctt                                    >  1:449685/1‑251 (MQ=255)                                                                                                                                                                                                              gTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGc                                                                                                           >  1:151967/1‑178 (MQ=255)                                                                                                                                                                                                                                ctACTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAAc                                                                                                                                                                                                                               >  1:429134/1‑44 (MQ=255)                                                                                                                                                                                                                                  aCTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAg              >  1:470140/1‑251 (MQ=255)                                                                                                                                                                                                                                  aCTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAg              >  1:714650/1‑251 (MQ=255)                                                                                                                                                                                                                                   cTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATAcccc                                                              >  1:806993/1‑202 (MQ=255)                                                                                                                                                                                                                                   cTTGAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAGa             <  1:859442/251‑1 (MQ=255)                                                                                                                                                                                                                                      gAATATATAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATcac                                                                                                                     >  1:228498/1‑144 (MQ=255)                                                                                                                                                                                                                                        atatatAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAAt                                                                                                                                                                                        <  1:879886/75‑1 (MQ=255)                                                                                                                                                                                                                                        atatatAATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAGAacac         >  1:461843/1‑250 (MQ=255)                                                                                                                                                                                                                                          atataATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATAccc                                                               >  1:422843/1‑194 (MQ=255)                                                                                                                                                                                                                                          atataATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCa                                                            <  1:220784/197‑1 (MQ=255)                                                                                                                                                                                                                                           tataATGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAGAACAcc        >  1:354522/1‑248 (MQ=255)                                                                                                                                                                                                                                              aaTGATTTATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAGAACACCCTGTCt  <  1:768994/251‑1 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    ATATTTTTTAATAAAGAAACTCTATTATGATAATGTCGCCAAGGATCATCTGGTTTATATCCGGTGGACCGATAAATGTACTCTTTTAAGCCAAGTGAAGCTAGCTCTCTATATGAGCGCTGCGCTACAGTTTTGTCTGACTTTGACGATTCAAATGCATAAAACTCCAATATCGCCATACAAACAATATCAGGATATGCATAATGTATCGCCCCATTTTTCTCTACTTGAATATATAATGATTCATCGCTAAACCCGCGATTAAACAGGTACGAACTTAAAAAAGTCATTCTATTTGTGGTAAATAGGCCACTTTGTATGGAAGAAGTCCACTCTGAAGATAATTCTTGTAATGTAATACGAGAAATATCACATACTTTAGCTAATCCTGTTTGTGTCAAGTAAGGAATGCCATTTCCTAATACCCCCATGCCAATTCCATTTATTTCTGCTTCTTTATCGATAGAAATATCAAGAACACCCTGTCT  >  1/1290018‑1290505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑