| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,257,041 | C→T | R164R (CGC→CGT) | unknown → | Thiamin ABC transporter, substrate‑binding component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,257,041 | 0 | C | T | 100.0% | 246.4 / NA | 83 | R164R (CGC→CGT) | unknown | Thiamin ABC transporter, substrate‑binding component |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (41/42); total (41/42) | |||||||||||
GATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGCACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATCTGAAAATAAAGATAATTACGCCGCCACCGAATTTGCC > 1/1256796‑1257278 | gATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAg > 1:378037/1‑251 (MQ=255) atTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAg > 1:100711/1‑251 (MQ=255) gtgtTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGt > 1:124471/1‑251 (MQ=255) tgtTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGt < 1:865743/250‑1 (MQ=255) tGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGa < 1:404259/251‑1 (MQ=255) ggATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGtt > 1:674048/1‑251 (MQ=255) aaTTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTAtt < 1:660874/251‑1 (MQ=255) tttCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTgg < 1:899655/251‑1 (MQ=255) tttCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTgg < 1:650390/251‑1 (MQ=255) tttCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTgg < 1:559885/251‑1 (MQ=255) tCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGgtg < 1:440136/251‑1 (MQ=255) tCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGgtg < 1:769854/251‑1 (MQ=255) ttGGATGAAGCGAAAAAAAGCAAATTGTGTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGAt < 1:321309/251‑1 (MQ=255) tGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAATCTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTGCCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATg < 1:503392/251‑1 (MQ=255) tGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATg < 1:147138/251‑1 (MQ=255) ttGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTg < 1:793910/251‑1 (MQ=255) tGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGgca < 1:719961/250‑1 (MQ=255) tGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGgca < 1:861122/250‑1 (MQ=255) cTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACgg < 1:453406/250‑1 (MQ=255) gCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGa > 1:148757/1‑251 (MQ=255) gAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACgg > 1:40112/1‑251 (MQ=255) aGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACggg > 1:331504/1‑250 (MQ=255) gCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAACGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCaa > 1:603093/1‑227 (MQ=255) ccAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCaa > 1:87071/1‑226 (MQ=255) ccAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGt < 1:278977/249‑1 (MQ=255) tGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGa < 1:888445/250‑1 (MQ=255) tGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGa < 1:352796/250‑1 (MQ=255) caacaGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGgc > 1:366401/1‑209 (MQ=255) gCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACaa < 1:527114/188‑1 (MQ=255) gCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGa > 1:244476/1‑250 (MQ=255) tGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTAc < 1:560260/251‑1 (MQ=255) gCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTAc > 1:454360/1‑250 (MQ=255) ccTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACgg > 1:680086/1‑251 (MQ=255) ccTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGGGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACgg > 1:675790/1‑251 (MQ=255) cTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTAcc > 1:878256/1‑161 (MQ=255) cTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTc > 1:759117/1‑250 (MQ=255) gCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGaaa > 1:629512/1‑251 (MQ=255) aCTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAacac < 1:581326/198‑1 (MQ=255) cTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACtt > 1:263362/1‑188 (MQ=255) cTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGac‑ac > 1:24251/1‑229 (MQ=255) cTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAagg > 1:417648/1‑250 (MQ=255) cTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAagg > 1:185050/1‑250 (MQ=255) ttATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGaaa < 1:624485/247‑1 (MQ=255) aTGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGAcg < 1:807019/118‑1 (MQ=255) aTGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAaggcgag > 1:637241/1‑251 (MQ=255) cTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGaaa < 1:564542/242‑1 (MQ=255) tttGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTAccc > 1:65763/1‑146 (MQ=255) tttGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGt > 1:501910/1‑200 (MQ=255) gtgtATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGAttt > 1:186316/1‑251 (MQ=255) gATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGaaa > 1:542891/1‑198 (MQ=255) aTAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGt > 1:865991/1‑184 (MQ=255) aaaaTAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATg > 1:584369/1‑119 (MQ=255) aaaaTAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGt > 1:416522/1‑251 (MQ=255) aaaaTAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGA‑CCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑g > 1:319772/1‑242 (MQ=255) aaaCTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAg < 1:197420/251‑1 (MQ=255) aaCTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGc < 1:400180/251‑1 (MQ=255) cTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCAc < 1:134723/251‑1 (MQ=255) cTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCAc < 1:836761/251‑1 (MQ=255) aaTCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGcc < 1:190115/251‑1 (MQ=255) aTCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGccc < 1:888552/251‑1 (MQ=255) aTCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGccc < 1:512134/251‑1 (MQ=255) cgccgAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTg < 1:278419/251‑1 (MQ=255) gccgAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑gtg < 1:889022/226‑1 (MQ=255) cgAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTat < 1:643211/251‑1 (MQ=255) cgAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTat < 1:202061/251‑1 (MQ=255) cgAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTat < 1:229386/251‑1 (MQ=255) cgAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTat < 1:444037/251‑1 (MQ=255) aaaaGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTatca < 1:850146/251‑1 (MQ=255) aaGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTatcatc < 1:675348/251‑1 (MQ=255) aaaGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATc < 1:286627/251‑1 (MQ=255) ttGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATCTGaaaa > 1:53171/1‑251 (MQ=255) gtggAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATCTGAAAATaa > 1:354371/1‑251 (MQ=255) aaCGTGAAGATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTgg > 1:880403/1‑66 (MQ=255) gATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑gtgt > 1:144477/1‑193 (MQ=255) gATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCt > 1:308685/1‑214 (MQ=255) gATTTACGCGTGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATCTGAAAATAAAGATAATTAcg > 1:488420/1‑250 (MQ=255) tGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGaaa > 1:352669/1‑164 (MQ=255) tGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGaaa > 1:18143/1‑164 (MQ=255) tGATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATCTGAAAATAAAGATAATTACGCCGCCACCGaa < 1:138373/251‑1 (MQ=255) gATTTATCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGACGGATTTA‑GTGTTAAGTTACAGCAc > 1:444570/1‑195 (MQ=255) aTCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGaaa < 1:803147/104‑1 (MQ=255) aTCAAGACCCGCGTACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGgc > 1:808021/1‑146 (MQ=255) aTCAAGACCCGCGTACCAGTAGCGTCGGACGCGGCTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACAC‑GAGACGGGAGGGAAAGGCCGGTCGGACAACTT‑CCGCGCATTCCTGAAAAGCGAGGCGGGCTTACGGGTT‑AGTTTCAGCCCTTCGCCCCTGTATCCTCAATTAACTGAAAATAAAGATAATTACGCCGCCACCCAAATTGcc > 1:542324/1‑250 (MQ=255) | GATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATCAAGACCCGCGCACCAGTAGCGTCGGACGCGGTTTATTGGTGTGGATGAATGCCGTTTACCCGGCGGAACAAGTGGCGCAGGCGTGGCAGCAACTTGCGAAACACACGGTGACGGTAGGGAAAGGCTGGTCGGAC‑ACTTACGGCGCATTCCTGAAAGGCGAGGCGGATTTA‑GTGTTAAGTTACAGCACTTCGCCCTTGTATCATCAATTATCTGAAAATAAAGATAATTACGCCGCCACCGAATTTGCC > 1/1256796‑1257278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |