| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,225,552 | T→C | T87T (ACT→ACC) | unknown → | Electron transport complex protein RnfE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,225,552 | 0 | T | C | 100.0% | 232.1 / NA | 80 | T87T (ACT→ACC) | unknown | Electron transport complex protein RnfE |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/39); total (41/39) | |||||||||||
ACAAGAACTGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACTAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATTGTGATCGGTCGCG > 1/1225312‑1225787 | acaAGAACTGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCg < 1:213716/251‑1 (MQ=255) gAACTGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCggg > 1:608649/1‑249 (MQ=255) aaCTGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCggg > 1:35625/1‑248 (MQ=255) aaCTGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGc < 1:652449/249‑1 (MQ=255) tGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGt < 1:395899/251‑1 (MQ=255) caacaaACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGttt > 1:734638/1‑251 (MQ=255) aGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAAc > 1:499674/1‑223 (MQ=255) aaGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGc < 1:235407/251‑1 (MQ=255) cGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACg < 1:230696/251‑1 (MQ=255) gTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACgtg > 1:769438/1‑251 (MQ=255) aCAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGcca < 1:279700/228‑1 (MQ=255) aCAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTAc < 1:192172/250‑1 (MQ=255) aCAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTAc < 1:33398/250‑1 (MQ=255) aaaaaCAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAac < 1:179649/251‑1 (MQ=255) aaaaCAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAaca < 1:770685/251‑1 (MQ=255) caacaTTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGt < 1:7357/251‑1 (MQ=255) acaTTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGc > 1:704530/1‑206 (MQ=255) ttGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTctct < 1:233851/251‑1 (MQ=255) gTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGc < 1:86970/181‑1 (MQ=255) gCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGa > 1:414191/1‑220 (MQ=255) gCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACAt > 1:574336/1‑251 (MQ=255) cGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGc > 1:524596/1‑179 (MQ=255) gAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAaca > 1:736001/1‑195 (MQ=255) aaCAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAATTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTAtg < 1:440524/251‑1 (MQ=255) cAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATg > 1:469283/1‑228 (MQ=255) cAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGa > 1:419156/1‑229 (MQ=255) cAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTAtgtg > 1:520650/1‑251 (MQ=255) cAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTAtgtg > 1:677318/1‑251 (MQ=255) cAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTAtgtg > 1:233089/1‑251 (MQ=255) aaGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTAc < 1:331708/186‑1 (MQ=255) gCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGTCCCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTgatgat > 1:861125/1‑250 (MQ=255) gCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGc < 1:491370/170‑1 (MQ=255) gCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAac > 1:421173/1‑184 (MQ=255) gCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGatca > 1:279620/1‑251 (MQ=255) cTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGc > 1:741689/1‑155 (MQ=255) cTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGatcat > 1:384616/1‑251 (MQ=255) aTGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGc < 1:348194/251‑1 (MQ=255) gAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGtt > 1:607906/1‑146 (MQ=255) taataTTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCa < 1:688197/251‑1 (MQ=255) taataTTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCa < 1:363399/251‑1 (MQ=255) taataTTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCa > 1:714219/1‑251 (MQ=255) tatTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACgg > 1:590746/1‑251 (MQ=255) aaaTGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCg < 1:49454/251‑1 (MQ=255) aaaaaaGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCtgtg > 1:435429/1‑251 (MQ=255) aaaaaGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCa < 1:220149/232‑1 (MQ=255) gAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATtgatg < 1:543179/250‑1 (MQ=255) tcattcaGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAcc < 1:884057/251‑1 (MQ=255) tcattcaGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAcc < 1:347449/251‑1 (MQ=255) cattcaGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAc > 1:264681/1‑249 (MQ=255) attcaGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCACTGAAATCCGCATTCCGATTTATGTGATGatc > 1:448609/1‑201 (MQ=255) aGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTAcgcg > 1:798800/1‑251 (MQ=255) ggCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTAcgc < 1:770018/248‑1 (MQ=255) gCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGc < 1:111452/100‑1 (MQ=255) aTCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCACATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTa > 1:428331/1‑251 (MQ=255) ggACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCaa > 1:517679/1‑251 (MQ=255) gACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCaa < 1:512183/250‑1 (MQ=255) aCCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAAtc < 1:280200/251‑1 (MQ=255) caacaaCTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAAtctc < 1:521284/251‑1 (MQ=255) acTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATtgat > 1:866212/1‑214 (MQ=255) cTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATc < 1:481528/239‑1 (MQ=255) ccGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGAttttt > 1:605031/1‑251 (MQ=255) tggtgCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGatc > 1:43620/1‑170 (MQ=255) gtgCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAc < 1:294907/215‑1 (MQ=255) tGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGttt < 1:659808/105‑1 (MQ=255) gggTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGt < 1:892825/98‑1 (MQ=255) ggTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCAc > 1:230950/1‑250 (MQ=255) ccGCTGCTGGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTAt < 1:136468/251‑1 (MQ=255) ctgctgGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAcc > 1:720983/1‑192 (MQ=255) ctgctgGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATtgt > 1:495009/1‑251 (MQ=255) ctgctgGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATtg > 1:174270/1‑250 (MQ=255) ctgatgGCGGTGTCCCACTACGTGACCAACGCCATCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATtgt < 1:706503/247‑1 (MQ=255) ccgctgGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATtg < 1:228987/248‑1 (MQ=255) ctgGCGGTGTCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATTGTGa < 1:527786/250‑1 (MQ=255) gtgtCCAACTCCGTGACCAACGCCCTCGGGCTGGGtt > 1:794563/1‑37 (MQ=255) gtgtCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAcc < 1:710446/183‑1 (MQ=255) gtgtCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATTGTGATCGGTcg > 1:841195/1‑251 (MQ=255) gtCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATAcc > 1:848425/1‑181 (MQ=255) gtCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAAc < 1:265578/232‑1 (MQ=255) gtCCAACTCCGTGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATTGTGATCGGTcgcg > 1:558463/1‑251 (MQ=255) tGACCAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCggg > 1:860611/1‑194 (MQ=255) | ACAAGAACTGCAACAAACCGAAGCCAAAAGTGCGGTTGACAAAAAACAACATTTTTTGAACGTTGGTTCTGCCAACGGCCCCGAAGGGGTGAATAAGCGAACAAGTGAGCTTATGAATAATATTTCAAATGAAAAAAGCATTTGGAAAACGATTTTCATTCAGGGCATCTGGACCAACAACTCCACCGTGGTGCAACTGCTTGGGTTGTGT‑CCGCTGCTGGCGGTGTCCAACTCCGTGACTAACGCCCTCGGGCTGGGTTTAGCCACCATGCTTGTGCTGACGTGTACGAACACGGTAGTTTCTCTTTTCCGTAAGCACATCCCCAATGAAATCCGCATTCCGATTTATGTGATGATCATCGCAACCACGGTAACCGCTGTGCAATTATTGATGAATGCCTATACCTACGCGCTTTATCAATCTCTCGGGATTTTTATTCCGCTCATCGTCACCAACTGTATTGTGATCGGTCGCG > 1/1225312‑1225787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |