| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,218,940 | C→T | R18C (CGC→TGC) | unknown → | Arginine pathway regulatory protein ArgR, repressor of arg regulon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,218,940 | 0 | C | T | 100.0% | 154.5 / NA | 53 | R18C (CGC→TGC) | unknown | Arginine pathway regulatory protein ArgR, repressor of arg regulon |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (25/28); total (25/28) | |||||||||||
AATTCAAACAGGCAGGTGCAAATGTGCGATCTAACTCAAATTTTTTATTTTCTATTGAACATAAAAATCACAAAAAACATAATTTTTTATGACCGCACTTTTCCGTTTTAATTAAATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTACGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCAAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTAATCGTCATTCGAACTT > 1/1218705‑1219186 | aaTTCAAACAGGCAGGTGCAAATGTGCGATCTAACTCAAATTTTTTATTTTCTATTGAACATAAAAATCACAAAAAACATAATTTTTTATGACCGCACTTTTCTGTTTTAATTAAATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACg > 1:257806/1‑251 (MQ=255) tttCTATTGAACATAAAAATCACAAAAAACATAATTTTTTATGACCGCACTTTTCTGTTTTAATTAAATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTa > 1:865667/1‑251 (MQ=255) aaCATAAAAATCACAAAAAACATAATTTTTTATGACCGCACTTTTCTGTTTTAATTAAATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAAcc < 1:53703/251‑1 (MQ=255) gTTTTAATTAAATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCAc > 1:108420/1‑250 (MQ=255) ttaaATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑aca < 1:646772/251‑1 (MQ=255) ttaaATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑aca < 1:320147/251‑1 (MQ=255) atatTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTa < 1:554074/211‑1 (MQ=255) atatTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACAcgcg > 1:122815/1‑251 (MQ=255) ttGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTa < 1:705997/203‑1 (MQ=255) gCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑aca > 1:551537/1‑237 (MQ=255) cTAAAGTCCCTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATgg > 1:457764/1‑251 (MQ=255) cTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATGCGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑aca < 1:495331/236‑1 (MQ=255) gTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTc < 1:578844/209‑1 (MQ=255) cACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTAACACACGCGTATGGAAATGGTGTAt > 1:573694/1‑251 (MQ=255) cTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGCATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTa > 1:679945/1‑250 (MQ=255) cTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGaa < 1:693974/235‑1 (MQ=255) aTGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCg > 1:839077/1‑248 (MQ=255) gCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAAc < 1:684503/243‑1 (MQ=255) ccACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCg < 1:252174/248‑1 (MQ=255) cTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑acac > 1:28573/1‑204 (MQ=255) cTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTAt < 1:891234/223‑1 (MQ=255) cTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTAc > 1:811649/1‑230 (MQ=255) cTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTAc < 1:87204/230‑1 (MQ=255) cTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCATA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTc > 1:650656/1‑241 (MQ=255) aTGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATcc < 1:606929/160‑1 (MQ=255) ttCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATAc < 1:896808/249‑1 (MQ=255) ttCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATCATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGc < 1:449739/238‑1 (MQ=255) agaCAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACg < 1:844515/247‑1 (MQ=255) agaCAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCAt > 1:878204/1‑251 (MQ=255) gaCAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGcc < 1:620701/233‑1 (MQ=255) aCAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGgtg > 1:504167/1‑203 (MQ=255) aaaCCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAag < 1:115094/251‑1 (MQ=255) aaCCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATcc < 1:456732/143‑1 (MQ=255) aaCCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAaga > 1:575379/1‑251 (MQ=255) aCCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑acac < 1:149649/183‑1 (MQ=255) ccTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAAt > 1:156847/1‑231 (MQ=255) gAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTgg > 1:140119/1‑102 (MQ=255) aaTAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGc < 1:111567/250‑1 (MQ=255) aTCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACAtt > 1:611585/1‑251 (MQ=255) ggACAATCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGAc > 1:784060/1‑250 (MQ=255) aTCTGGTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAAc < 1:373906/251‑1 (MQ=255) ggTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGaa < 1:428368/163‑1 (MQ=255) ggTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGt > 1:846742/1‑212 (MQ=255) ggTCAAAGCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCa > 1:446686/1‑251 (MQ=255) gCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAAt < 1:557069/195‑1 (MQ=255) gCATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAAc > 1:773630/1‑203 (MQ=255) cATTTAAAACTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTaa < 1:409564/249‑1 (MQ=255) aaaCTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAag < 1:732152/205‑1 (MQ=255) aaaCTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGc < 1:123193/216‑1 (MQ=255) aCTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTAAt < 1:588682/242‑1 (MQ=255) aCTTTATTATGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTAATCGTCATTCg > 1:283961/1‑251 (MQ=255) ttattaTGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTAATCGTCATTCGaa > 1:423823/1‑250 (MQ=255) attaTGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCTAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTAATCGTCATTCGAACtt > 1:326801/1‑251 (MQ=255) | AATTCAAACAGGCAGGTGCAAATGTGCGATCTAACTCAAATTTTTTATTTTCTATTGAACATAAAAATCACAAAAAACATAATTTTTTATGACCGCACTTTTCCGTTTTAATTAAATATTTATTTGCTAAAGTCACTGCTTTTATGCAAAATTCAGCCACTTATGTTCCACAAGAGACAAACCTATGTTGAATAAAAATCCGGACAATCTGGTCAAAGCATTTAAAACTTTATTACGCGAAGAAAAATACGGTTCACAAACGGAAATTGCCGCCGAGCTTCAAAAACTTGGTTTTCGTAGCGTAAACCAATCGAAAGTATCCCGTATGCTCAGCAAATTCGGCGCCGTGCGCACCCGTA‑‑ACACGCGTATGGAAATGGTGTATTGCCTACCGAGCGAACTCAGCGTGCCGAATACTCAAACGTCATTAAGAGATTTAGTGCTGGACATTGACCATAACGGCATATTAATCGTCATTCGAACTT > 1/1218705‑1219186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |