| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,113,544 | T→C | intergenic (‑277/+26) | unknown ← / ← unknown | Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)/Type I restriction‑modification system, restriction subunit R (EC 3.1.21.3) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,113,544 | 0 | T | C | 100.0% | 177.7 / NA | 61 | intergenic (‑277/+26) | unknown/unknown | Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)/Type I restriction‑modification system, restriction subunit R (EC 3.1.21.3) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (35/26); total (35/26) | |||||||||||
ACATATAGTTGCGTTATAAAAATTTTGCACAAGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCTACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGCTTCTATGTTTAAGTTTTCCGAAGCAATG > 1/1113306‑1113783 | acaTATAGTTGCGTTATAAAAATTTTGCACAAGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCAc < 1:36897/246‑1 (MQ=255)acaTATAGTTGCGTTATAAAAATTTTGCACAAGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACttttt > 1:858863/1‑251 (MQ=255) taGTTGCGTTATAAAAATTTTGCACAAGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAgggg < 1:564637/251‑1 (MQ=255) aGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGAt > 1:47062/1‑251 (MQ=255) aGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGAt > 1:76359/1‑251 (MQ=255) gtTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTaaa > 1:867666/1‑251 (MQ=255) ttGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAAt < 1:23906/251‑1 (MQ=255) ttttttACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAgg > 1:577708/1‑187 (MQ=255) cTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATa > 1:748184/1‑251 (MQ=255) gAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATActt > 1:317618/1‑251 (MQ=255) attGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAGTTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATActtttctt > 1:200966/1‑251 (MQ=255) ttGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATActtttcttt < 1:629813/251‑1 (MQ=255) aCATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCAcc < 1:51148/193‑1 (MQ=255) aCATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTT‑AATTTCCACCGCACTTTTTAGGGGGAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACttttcttttt > 1:436556/1‑249 (MQ=255) tAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAA‑TTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCa > 1:893865/1‑251 (MQ=255) tAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGata < 1:101208/251‑1 (MQ=255) gCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCg > 1:879110/1‑251 (MQ=255) gCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCg > 1:860163/1‑251 (MQ=255) cTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAg > 1:216523/1‑168 (MQ=255) cTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAAt < 1:741534/192‑1 (MQ=255) ccAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACttttt > 1:812457/1‑143 (MQ=255) aaTTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATActtttc > 1:47242/1‑215 (MQ=255) aTTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTGTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCt < 1:424796/251‑1 (MQ=255) ttGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGc < 1:207373/251‑1 (MQ=255) ggTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCt < 1:349431/240‑1 (MQ=255) ggTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAggg > 1:707323/1‑249 (MQ=255) gTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGAt > 1:790937/1‑224 (MQ=255) aaaaaTCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCa < 1:340053/251‑1 (MQ=255) tattaAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAAt > 1:261682/1‑150 (MQ=255) attaAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCt < 1:278621/225‑1 (MQ=255) attaAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGc < 1:617479/230‑1 (MQ=255) attaAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTg > 1:484689/1‑251 (MQ=255) ttGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTc < 1:358558/251‑1 (MQ=255) gtgtAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCg > 1:569329/1‑250 (MQ=255) aaTTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCAttt < 1:476639/219‑1 (MQ=255) aTTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGc < 1:8093/206‑1 (MQ=255) gAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGc > 1:313768/1‑197 (MQ=255) gAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGaa > 1:250358/1‑251 (MQ=255) tgatgaGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGAt < 1:165360/173‑1 (MQ=255) tgatgaGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAaca > 1:877076/1‑250 (MQ=255) gatgaGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGc > 1:301838/1‑177 (MQ=255) gatgaGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCAt > 1:703551/1‑202 (MQ=255) gatgaGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATg < 1:318894/244‑1 (MQ=255) atgaGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGa < 1:88337/170‑1 (MQ=255) gggTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAg > 1:659022/1‑82 (MQ=255) gggTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATAc > 1:142584/1‑86 (MQ=255) gggTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATc < 1:491359/204‑1 (MQ=255) gggTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTcg < 1:211412/229‑1 (MQ=255) gggTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAAt > 1:177952/1‑238 (MQ=255) gggTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAatat > 1:521036/1‑251 (MQ=255) ttttGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTc < 1:782780/152‑1 (MQ=255) ttGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCg < 1:453138/251‑1 (MQ=255) tGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGc < 1:497432/251‑1 (MQ=255) gaaaAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACg > 1:294356/1‑237 (MQ=255) gaaaAAAGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGCTTCTa > 1:581666/1‑251 (MQ=255) aaaaaaGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAat < 1:501661/230‑1 (MQ=255) aaaaaGTGCGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGt > 1:506043/1‑236 (MQ=255) cGGTGAAAAAACACCTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGCTTCTATGTTTAAGtt < 1:605256/251‑1 (MQ=255) ccTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACt > 1:731807/1‑136 (MQ=255) ccTTAAATTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGCTTCTATGTTTAAGTTTTCCGAAGCAATg > 1:700385/1‑251 (MQ=255) aaTTTCCACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTAAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGCTTCTATGTTTAAGTTTTCCGAAGc > 1:565566/1‑242 (MQ=255) | ACATATAGTTGCGTTATAAAAATTTTGCACAAGATAATGTGTTGGATGTGAAAATTCAAGTACTAAATTTTTTACTTGAATTATTGACATAAAATAACTGCTTATAAACCAAGAAGAATTTTTTGCGTGGTAAAAATCGCATTATTAAAATTTGTGTAAAGGGACAAATTTTATGCGAAATGATGAGGGTAGGGCGTTTTGAAAGAAAAAAGTGCGGTGAAAAAACACCTTAAATTTCTACCGCACTTTTTAGGGGAAAGGTGATTAGATACTTCCACCGATGCCCTTAAATTTCTCAACAAATTCCGCAATTTTTTGGAAAATACTTTTCTTTTTCTTCAGATATTCCGGATTGAGCGGACTCATCTTAGGCAGGGCTTCATTTAAATCCGTGCCGTTTTCGCTGGCGTACTCGCGTTTTAATGAAACACTAATATAACGTTTAGCCGCTTCTATGTTTAAGTTTTCCGAAGCAATG > 1/1113306‑1113783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |