| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,090,832 | T→C | D331D (GAT→GAC) | unknown → | Oligopeptide ABC transporter, substrate‑binding protein OppA (TC 3.A.1.5.1) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,090,832 | 0 | T | C | 100.0% | 179.0 / NA | 63 | D331D (GAT→GAC) | unknown | Oligopeptide ABC transporter, substrate‑binding protein OppA (TC 3.A.1.5.1) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (29/34); total (29/34) | |||||||||||
CAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGATAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGGAGAACATTGCTAAAGGCGAGTTTCAAATCGCCCGCGCCGGTTGGTG > 1/1090590‑1091074 | cAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTg < 1:258607/251‑1 (MQ=255) cgcCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTATACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGc < 1:430469/248‑1 (MQ=255) aTGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAATTTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAAc < 1:885336/250‑1 (MQ=255) ccGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAg > 1:72654/1‑250 (MQ=255) gcaACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGCTGAACAattatt < 1:453115/237‑1 (MQ=255) gATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGaa > 1:375293/1‑251 (MQ=255) aTCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGc < 1:66010/230‑1 (MQ=255) aaCGCAATCCTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCAc < 1:258774/251‑1 (MQ=255) aCGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCAc > 1:133500/1‑250 (MQ=255) aCGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCAc > 1:547179/1‑250 (MQ=255) tCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAattat > 1:25173/1‑210 (MQ=255) tCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAg > 1:335093/1‑214 (MQ=255) tCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAAc < 1:190147/249‑1 (MQ=255) aCTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCAc < 1:702368/233‑1 (MQ=255) aCTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTaa > 1:287868/1‑251 (MQ=255) ttGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGtt < 1:258645/251‑1 (MQ=255) aTTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGatcaa > 1:868668/1‑251 (MQ=255) aTTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGatcaa > 1:763509/1‑251 (MQ=255) aTTTTTACACCTTTAA‑TTTTAAAACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGatc < 1:637043/249‑1 (MQ=255) tttttACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGatcaat > 1:71543/1‑251 (MQ=255) ttttACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGc > 1:752600/1‑195 (MQ=255) cacCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAg < 1:325207/251‑1 (MQ=255) ccTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTg > 1:774109/1‑251 (MQ=255) ccTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTg > 1:503556/1‑251 (MQ=255) tttAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAAc < 1:497144/220‑1 (MQ=255) ttAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCaa < 1:781466/251‑1 (MQ=255) aa‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAg > 1:386007/1‑251 (MQ=255) ttttAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTc < 1:731885/251‑1 (MQ=255) cacGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTgg < 1:151240/251‑1 (MQ=255) cGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAg < 1:863218/234‑1 (MQ=255) cGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCAGTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAAGTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAg < 1:738607/234‑1 (MQ=255) cacaACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAg < 1:44278/251‑1 (MQ=255) aaCTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAgggg < 1:670408/251‑1 (MQ=255) aCTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGt < 1:339991/251‑1 (MQ=255) cgcAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGAtt < 1:473089/251‑1 (MQ=255) gTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAGCGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAatta > 1:617485/1‑144 (MQ=255) gTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGtt < 1:635432/196‑1 (MQ=255) gTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGtt < 1:664725/196‑1 (MQ=255) gTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGt > 1:220242/1‑250 (MQ=255) gCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTgg > 1:19735/1‑224 (MQ=255) gCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAgggg > 1:84574/1‑232 (MQ=255) gCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCg > 1:249727/1‑250 (MQ=255) gTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCaa > 1:138861/1‑251 (MQ=255) ggCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGCTGATTCGCACGTGGTCGCAATCgg > 1:259679/1‑251 (MQ=255) gCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACaa > 1:671023/1‑132 (MQ=255) tGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATg > 1:888186/1‑251 (MQ=255) gatgaCATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGAt < 1:199721/246‑1 (MQ=255) gatgaCATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGa > 1:690165/1‑251 (MQ=255) aCATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACaa < 1:55497/117‑1 (MQ=255) tCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCgg < 1:719250/251‑1 (MQ=255) cAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAggg < 1:838653/250‑1 (MQ=255) gTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATg > 1:82774/1‑251 (MQ=255) gTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAAAAGGCACCGCTCAAACTGACCCTAAGTTACGa < 1:38268/163‑1 (MQ=255) tATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCg < 1:790077/251‑1 (MQ=255) aaaGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAAcaacaa < 1:293590/251‑1 (MQ=255) aaaaaCAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCt < 1:463924/251‑1 (MQ=255) ggATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGAtt > 1:778222/1‑179 (MQ=255) ttAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGAATCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGGAGAACATTGCTaa < 1:549194/251‑1 (MQ=255) tAATTTTTTACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGTAGAACaggcttaaaaatgcgg < 1:432984/251‑16 (MQ=255) ttttttACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAAc > 1:415254/1‑59 (MQ=255) ttACCAATTTCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGGAGAACATTGCTAAAGGCGAGTTTCAAAt < 1:154981/251‑1 (MQ=255) tttCCATGCAAACCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGGAGAACATTGCTAAAGGCGAGTTTCAAATCGCCcg > 1:793100/1‑250 (MQ=255) aCCATCGACAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGGAGAACATTGCTAAAGGCGAGTTTCAAATCGCCCGCGCCGGTTGgtg > 1:620366/1‑251 (MQ=255) | CAACAGGACGTCAGCGCCTTAGATGTGGTGTGGCAGCCGCAGCAACAAACGGATCAAACGCAATACTTCCCGCAACTTTGCACCTATTTTTACACCTTTAA‑TTTTAACACGCCACAACTGGCGCAAAGCCCGGTGCGTAAGGCATTGGCAATGATGACATCTGCCCGCAGTTTATTGCCGGAAAGTAAAAACAGGATTCCTTTAACGGATAATTTTTTACCAATTTCCATGCAAACCATCGATAGCCGGTGGGAGCAAACGCCGGTTGAACAATTATTAAGCCAAGCGCGAATTGGAGAGAAGGCACCGCTCAAACTGACCCTAAGTTACGATCAATCAGAAGTGCAAAGTCAACTGGTGCAGGGGTTGATTCGCACGTGGTCGCAATCGGACATGATTCAGATTATCGGCGAAGGGATGCCGAAACAACAATTGCTGGAGAACATTGCTAAAGGCGAGTTTCAAATCGCCCGCGCCGGTTGGTG > 1/1090590‑1091074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |