| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 31460 = | 0 (0.000) | 11 (0.140) +GCTTATTCTGTGCGGCACTGTTGGCA |
8/378 | 4.8 | 20.9% | intergenic (‑161/+48) | unknown/unknown | FIGfam050825/Cytochrome c‑type heme lyase subunit nrfF, nitrite reductase complex assembly / Cytochrome c‑type heme lyase subunit nrfG, nitrite reductase complex assembly |
| ? | 1 | 31616 = | 95 (1.080) | coding (942/1050 nt) | unknown | Cytochrome c‑type heme lyase subunit nrfF, nitrite reductase complex assembly / Cytochrome c‑type heme lyase subunit nrfG, nitrite reductase complex assembly | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TTATTTGTACGTTTTACACTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGTCAAAACC > 1/31442‑31703 | gtgccgcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATc > 1:56838/19‑249 (MQ=255) tgccgcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGAt < 1:653252/230‑1 (MQ=255) tgccgcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATcc < 1:691336/232‑1 (MQ=255) tgccgcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATcc < 1:233080/232‑1 (MQ=255) cgcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGt < 1:398962/237‑1 (MQ=255) gcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGt > 1:205554/14‑250 (MQ=255) gcacagaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGt > 1:324817/14‑250 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACcattttca < 1:559786/89‑1 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCAt > 1:508765/9‑133 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGaa < 1:54309/140‑1 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAg < 1:40642/159‑1 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGaat < 1:16261/170‑1 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGt < 1:200001/237‑1 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGTCaaaa > 1:418523/9‑250 (MQ=255) gaataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGTCaaaa > 1:127057/9‑250 (MQ=255) aataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGTCAAAAcc < 1:332372/244‑1 (MQ=255) aataagccTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGTCAAAAc < 1:406124/243‑1 (MQ=255) | TTATTTGTACGTTTTACACTGCCGCCCCGGCGCCGATAATGAGGGTCTCATGGCTGACGGTTCGACTCATTGCATATTCCCCTTCTGCATAAAATCCACCATTTTCATTTTCTGAATGATCGCACGACGATCCACCGTGGCATTGCCCGAATCTAGAATTTGCTGCCAATAATCAAGTGCGGTGGAATAATCCCGCGTTTTTAAGGCTTCCGCCGCCAAAAGGGACAGAACCGATACCTCTTTGCGATCCTGCGTCAAAACC > 1/31442‑31703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |