Predicted mutation
evidence seq id position mutation annotation gene description
MC JC 1 1,991,907 Δ836 bp [unknown]–[unknown] [unknown], [unknown]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ 1 1991907 1992742 836 63 [0] [0] 63 [unknown]–[unknown] [unknown],[unknown]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 19919060 (0.000)63 (0.720) 43/426 0.7 100% coding (670/672 nt) unknown Type II secretory pathway, component PulJ
?1 1992743 = 0 (0.000)coding (368/522 nt) unknown Type II secretory pathway, pseudopilin PulG

ACGCCGCCTCCGGAAATTTGCCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1991659‑1991906
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAATTTTCCACGCGCGCCTGAATTTGACGAAGAAAGACATAAAGTTTTTGTT  >  1/1992743‑1992989
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
ACGCCGCCTCCGGAAATTTGCCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAAC                                                                                                                                                                                                                                                      <  1:515835/251‑1
               ATTTGCCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAA                                                                                                                                                                                                                                       <  1:891120/251‑1
               ATTTGCCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAA                                                                                                                                                                                                                                       <  1:267932/251‑1
               ATTTGCCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAACCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAA                                                                                                                                                                                                                                       <  1:429985/251‑1
                    CCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGG                                                                                                                                                                                                                                              >  1:214333/1‑239
                      CTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGC                                                                                                                                                                                                                                <  1:658923/251‑1
                       TAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAA                                                                                                                                                                                                                                       >  1:771218/1‑243
                        AACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCGACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTC                                                                                                                                                                                                                                                    >  1:834031/1‑229
                        AACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCT                                                                                                                                                                                                                               >  1:173682/1‑250
                        AACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCT                                                                                                                                                                                                                               >  1:226508/1‑250
                        AACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTT                                                                                                                                                                                                                                                          >  1:632667/1‑223
                        AACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATATTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTC                                                                                                                                                                                                                              <  1:811767/251‑1
                         ACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGACAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCA                                                                                                                                                                                                                             >  1:429556/1‑251
                         ACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAAC                                                                                                                                                                                                                                      <  1:891771/242‑1
                          CATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGC                                                                                                                                                                                                                                    <  1:106029/243‑1
                              AGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAA                                                                                                                                                                                                                                       >  1:241931/1‑236
                                TGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACAC                                                                                                                                                                                                                      <  1:684282/251‑1
                                    GCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGG                                                                                                                                                                                                                                              <  1:343419/223‑1
                                       ATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACTGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACG                                                                                                                                                                                                                                     <  1:415252/229‑1
                                          ATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCA                                                                                                                                                                                                            <  1:264798/251‑1
                                          ATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCAGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCA                                                                                                                                                                                                            <  1:184525/251‑1
                                             AACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAA                                                                                                                                                                                                                                       <  1:104061/221‑1
                                                         CGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAA                                                                                                                                                                                             <  1:245759/251‑1
                                                              GGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAAC                                                                                                                                                                                                                                                      <  1:856635/189‑1
                                                               GATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATG                                                                                                                                                                                        <  1:262120/250‑1
                                                               GATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATG                                                                                                                                                                                        <  1:365766/250‑1
                                                               GATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATG                                                                                                                                                                                        <  1:291995/250‑1
                                                               GATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAA                                                                                                                                                                                             >  1:234767/1‑245
                                                                                 GATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCA                                                                                                                                                                                                                          >  1:633227/1‑198
                                                                                          AACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACA                                                                                                                                                            >  1:662261/1‑251
                                                                                            CAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTCCGGccagccaccggg                                                                                                                                                          >  1:333347/1‑239
                                                                                            CAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATG                                                                                                                                                                                        <  1:241205/221‑1
                                                                                              AATCACCTGAAAACGAATTTGATTTTGCTGCGCCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACGCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGAT                                                                                                                                                        <  1:136723/251‑1
                                                                                              AATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGAT                                                                                                                                                        <  1:661611/251‑1
                                                                                                    CTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGC                                                                                                                                                  <  1:515498/251‑1
                                                                                                                      TTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTAT                                                                                                                                >  1:732736/1‑251
                                                                                                                      TTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTAT                                                                                                                                <  1:507843/251‑1
                                                                                                                      TTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGG                                                                                                                                                   >  1:815607/1‑232
                                                                                                                       TGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATG                                                                                                                                                                                        <  1:359703/194‑1
                                                                                                                             ACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAA                                                                                                                                                                                             <  1:566601/183‑1
                                                                                                                              CCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATT                                                                                                                        >  1:639173/1‑251
                                                                                                                              CCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACAC                                                                                                                                                                                                                      <  1:167773/157‑1
                                                                                                                                    ATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAAC                                                                                                                                                                                                                                      <  1:197740/135‑1
                                                                                                                                      TCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCG                                                                                                                    >  1:99215/1‑247
                                                                                                                                           AGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAA                                                                                                                                                                                             <  1:474247/169‑1
                                                                                                                                              CAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACAC                                                                                                         <  1:350593/250‑1
                                                                                                                                                   CGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGC                                                                                                   <  1:420226/251‑1
                                                                                                                                                          ACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTA                                                                                            <  1:804037/251‑1
                                                                                                                                                                TTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGA                                                                                       <  1:496633/250‑1
                                                                                                                                                                  GATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCA                                                                                    >  1:348392/1‑251
                                                                                                                                                                                   ATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACAC                                                                                                         >  1:896414/1‑213
                                                                                                                                                                                   ATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGG                                                                                                                                                   <  1:177343/171‑1
                                                                                                                                                                                     TTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTAC                                                                                           >  1:780574/1‑225
                                                                                                                                                                                       GGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGA                                                                                       <  1:771854/227‑1
                                                                                                                                                                                            GCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAAT                                                                                                                                                                                         >  1:654233/1‑124
                                                                                                                                                                                                     CGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAATT                                                 >  1:371309/1‑251
                                                                                                                                                                                                         GATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAAT                                                  >  1:304028/1‑246
                                                                                                                                                                                                         GATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTAC                                                                                           >  1:899228/1‑205
                                                                                                                                                                                                                          CTTTTTCGTTGCACATTGCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAATTTTCCACGCGCGCCTGAATTTG                            >  1:594305/1‑251
                                                                                                                                                                                                                                           GCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACC                                                                 >  1:765022/1‑197
                                                                                                                                                                                                                                           GCCCCATTGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCG                                                                                                                                             >  1:152407/1‑121
                                                                                                                                                                                                                                                  TGGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAATTTTCCACGCGCGCCTGAATTTGACGAAGAAAGACATAAAGTTTTTG    <  1:380788/251‑1
                                                                                                                                                                                                                                                   GGTTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGGTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGA                                                                                 >  1:407592/1‑173
                                                                                                                                                                                                                                                     TTAAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAATTTTCCACGCGCGCCTGAATTTGACGAAGAAAGACATAAAGTTTTTGTT  <  1:225752/250‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
ACGCCGCCTCCGGAAATTTGCCCTAACATAAGTGGGGCTATTATAAACTAATTTCACCGCGAGGATATTTTACCGACACCTGATTTTGCGAACAAATCACCTGAAAACGAATTTGATTTTGCTGCACCTGTGATTCACAAGGCAACCCGAGAAAACGGCGTTGATGCTGATTTTCGGCAATTTGGATGGCTTGAAAACGCTGATAAATTTCCACCGCACTTTTTCGTTGCACATTGCCCCATTGGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1991659‑1991906
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taAACTCCAAAGGATAATAACGCTTGCTCACCAACACAGTTTCAGCAAAAGCGGGATAATAAAAATGGGCGGAAACATTTTGCGGGCAAGCAACAGGATTTAGGCAATCGCACAAATGGCTATTTTTAATTTGCGCTGTCAAACACCAGCGCTTTCCTACAGGATCACGATTTGCCAATAACAACCAGATGTCCGTAGAATTTTCCACGCGCGCCTGAATTTGACGAAGAAAGACATAAAGTTTTTGTT  >  1/1992743‑1992989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.