Predicted mutation
evidence seq id position mutation annotation gene description
JC 1 872,246 +GGTAAA intergenic (+511/+113) unknown → / ← unknown Mobile element protein/tRNA‑Met‑CAT

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 8722420 (0.000)30 (0.350)
+TAAAGG		 21/410 2.4 100% intergenic (+507/+117) unknown/unknown Mobile element protein/tRNA‑Met‑CAT
?1 872243 = 0 (0.000)intergenic (+508/+116) unknown/unknown Mobile element protein/tRNA‑Met‑CAT

CTTATTTACGTTTGAACAATATGCTGATTTAAACATTGAAAAAACCACTAATCGGCTTGAGGGATTATTTAAAGAATTAAAACAAAAATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/871995‑872242
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACCAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGCGTAGAATTAAGGCGCGATTATAGGGAAATATCGG  >  1/872243‑872478
                                                                                                                                                                                                                                                        ||||||                                                                                                                                                                                                                                            
CTTATTTACGTTTGAACAATATGCTGATTTAAACATTGAAAAAACCACTAATCGGCTTGAGGGATTATTTAAAGAATTAAAACAAAAATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAA                                                                                                                                                                                                                                                 <  1:56156/251‑1
                                                       CTTGAGGGATTATTTAAAGAATTAAAACAAAAATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAAT                                                                                                                                                                                          <  1:764449/251‑1
                                                                                    AAAATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGA                                                                                                                                                             >  1:830659/1‑251
                                                                                    AAAATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATAC                                                                                                                                                                                                             >  1:129233/1‑203
                                                                                      AATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGA                                                                                                                                                             >  1:571227/1‑249
                                                                                      AATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAA                                                                                                                                                                                                   >  1:251235/1‑211
                                                                                           ACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATT                                                                                                                                                                                 >  1:147116/1‑224
                                                                                           ACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTAT                                                                                                                                                                                                        >  1:351670/1‑201
                                                                                                      TGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGT                                                                                                                                           >  1:591343/1‑251
                                                                                                       ggcTTAACAAGGAGGCGTAAAATAGTGTTTATTATCGATTTTCTAAATAGAACGAGCTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTA                                                                                                                                          >  1:875706/4‑251
                                                                                                        GTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAG                                                                                                                                                                           >  1:871317/1‑217
                                                                                                                                   TTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGT                                                                                                                                                >  1:780155/1‑217
                                                                                                                                          GGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATAC                                                                                                                                                                                                             >  1:86467/1‑149
                                                                                                                                           GATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACT                                                                                                       <  1:165534/250‑1
                                                                                                                                                                     AAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGT                                                                            <  1:293933/251‑1
                                                                                                                                                                           ACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTT                                                                                                                                                                >  1:494783/1‑161
                                                                                                                                                                                TTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATAC                                                                                                                                                                                                             <  1:66003/111‑1
                                                                                                                                                                                                   TTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGG                                              <  1:363407/251‑1
                                                                                                                                                                                                                      CTAAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGctgtctcttatacacattccg                           >  1:604938/1‑230
                                                                                                                                                                                                                        AAATTCCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATG                                                                                                                           <  1:215234/153‑1
                                                                                                                                                                                                                             CCCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAA                                                                                                                                                                                                   <  1:138883/76‑1
                                                                                                                                                                                                                              CCCTGATAGGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATAT                                                                                                                            >  1:542571/1‑146
                                                                                                                                                                                                                                      GGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGCGTAGAATTAAGGCGCCATTATAGGG           >  1:699306/1‑251
                                                                                                                                                                                                                                      GGGTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGC                                    <  1:199024/226‑1
                                                                                                                                                                                                                                        GTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGCGTAGAATTAAGGCGCCATTATAGGGAA         >  1:486240/1‑251
                                                                                                                                                                                                                                        GTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAAC                                                                                                  >  1:881600/1‑162
                                                                                                                                                                                                                                        GTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGAC                                                                                                        >  1:635544/1‑156
                                                                                                                                                                                                                                        GTACTATATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGG                                                                                                                                                                                                      <  1:589643/62‑1
                                                                                                                                                                                                                                               ATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGCGTAGAATTAAGGCGCCATTATAGGGAAATATtgg  >  1:701487/1‑248
                                                                                                                                                                                                                                               ATCAGGTACTAAAGGTAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACTAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGCGTAGAATTAAGGCGCCATTATAGGGAAATATtgg  >  1:386206/1‑248
                                                                                                                                                                                                                                                        ||||||                                                                                                                                                                                                                                            
CTTATTTACGTTTGAACAATATGCTGATTTAAACATTGAAAAAACCACTAATCGGCTTGAGGGATTATTTAAAGAATTAAAACAAAAATTAACTGTGCATAATGGTTTAACAAGGAGGCGTAAAATAGTGTTTATTAAGGATTTTCTAAATAGAAAGAGTTGGTAAAACCAACTCTTTTGTCTACTATGCCTATTTTTAGTACCTAGAAAATCACTAAATTCCCCTGATAGGGTACTATATCAGGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/871995‑872242
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAACTAAAATGAATCAAAAAAAGCATAATACACTATGGAAATGATTAAATATGTTAATTTATAAGTGGTTTTGGTTTGACTTGAATCAGAGTGAAGTAGTATGGATTAATATGTTGGTGCCCCCAACAGGACTTGAACCTGTGACCAATCGATTATGAGTCGACTGCTCTGACCGACTGAGCTATGGGGGCGGTGTGAGCGTAGAATTAAGGCGCGATTATAGGGAAATATCGG  >  1/872243‑872478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.