| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 370152 = | 0 (0.000) | 23 (0.260) | 6/428 | 6.0 | 30.1% | coding (95/348 nt) | unknown | hypothetical protein |
| ? | 1 | 447704 = | 107 (1.220) | intergenic (+227/‑275) | unknown/unknown | Mobile element protein/Deoxyribose‑phosphate aldolase (EC 4.1.2.4) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTTAGTATAAGGCGATTTTATGCCATCAAGCCCTCTTTCACGAAAGGCTTTTAACCAATAAATGACTTGAGAATGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/370398‑370152‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gAAATTTAGCCACCGCTCATATACCGAAATCCTGCTC > 1/447704‑447739 GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTA > 1:10064/1‑251GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTA > 1:777479/1‑251GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTA > 1:749024/1‑251GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTA > 1:500863/1‑251 TTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAG < 1:660182/251‑1 CCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCC > 1:648967/1‑243 CCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTT < 1:270846/239‑1 CCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATA < 1:106261/251‑1 CAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATAT < 1:189131/251‑1 CAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATAT < 1:148362/251‑1 ATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATAC < 1:313929/251‑1 ATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATAC < 1:391629/251‑1 ATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATAC < 1:286283/251‑1 ATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATAC < 1:574671/251‑1 ATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATAC < 1:211881/251‑1 ATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATAC < 1:884625/251‑1 CCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATACCGA > 1:785702/1‑251 AACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATACCGAAATCC < 1:324379/251‑1 AACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATACCGAAATCC < 1:157235/251‑1 AACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATACCGAAATCC < 1:816098/251‑1 TTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATAT > 1:851405/1‑237 TTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATACCGAAATCCTGCTC < 1:753825/251‑1 TTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAATTTAGCCACCTCTCATATACCGAAATCCTGCTC < 1:853422/251‑1 GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTTAGTATAAGGCGATTTTATGCCATCAAGCCCTCTTTCACGAAAGGCTTTTAACCAATAAATGACTTGAGAATGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/370398‑370152‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gAAATTTAGCCACCGCTCATATACCGAAATCCTGCTC > 1/447704‑447739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |